Soft clip bases visualisation on Savant

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Jonathan Landry

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Mar 16, 2012, 11:30:36 AM3/16/12
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Dear all,

I would like to visualize the soft clipped bases of reads on the genome browser.
Maybe I missed this in the manual, but is there an option to activate?

Thanks for your help,
Best,
Jonathan

Eric J. M. Smith

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Mar 16, 2012, 1:06:04 PM3/16/12
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On 16 March 2012 11:30, Jonathan Landry <land...@gmail.com> wrote:
> I would like to visualize the soft clipped bases of reads on the genome
> browser.
> Maybe I missed this in the manual, but is there an option to activate?

Hi Jonathan,

That's not something Savant currently supports. It would be easy
enough to add if there's demand for it.

Sorry,

Eric Smith
Tarkvara Design Inc.

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