New Release: SATe 2.2.2

[Jamie Oaks]

Version 2.2.2 of SATe has just been released:

http://phylo.bio.ku.edu/software/sate/sate.html

Updates include:

- [BUG FIX] Previous version had used the "Centroid"
decomposition even when the user specified
"Longest."
- [BUG FIX] Multiple issues dealing the handling very
small subsets of taxa. These arise frequently
in the "longest" edge decomposition, but
are rare when using centroid decomposition.
- [BUG FIX] Input sequences with all gaps no longer
create problems (this can reasonably occur
in multi-locus runs).
- [CHANGES] FastTree binary in Mac bundle is
compiled for more architectures.
- [CHANGES] Updated documentation.
- [CHANGES] RAxML user-specified arguments
implemented in CLI.
- [CHANGES] Post-processing RAxML search now
uses start_tree_search_from_current boolean
to determine whether to use the tree resulting
from the SATe algorithm as starting tree.
- [CHANGES] Updated bundled data.