Error with Diamond

[Kabir Peay]

I'm running the test_of_master_script_tiny.bash on our cluster and everything went smoothly until Diamond, when I get the following error:

Now starting on DIAMOND org annotations at: 

Fri Jun 10 07:36:24 PDT 2022

Now starting on  /scratch/users/kpeay/samsa2/output_test/step_3_output_test/control_1_TINY.ribodepleted.fastq

Converting to  /scratch/users/kpeay/samsa2/output_test/step_3_output_test/control_1_TINY.RefSeq_annotated

diamond v0.8.38.100 | by Benjamin Buchfink <buch...@gmail.com>

Check http://github.com/bbuchfink/diamond for updates.

#CPU threads: 128

Scoring parameters: (Matrix=BLOSUM62 Lambda=0.267 K=0.041 Penalties=11/1)

#Target sequences to report alignments for: 1

Temporary directory: ./

Opening the database...  [0.050496s]

Error: Open files hard limit is too low. Set lower value for --bin parameter.

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I've been doing a little digging but am not quite clear if this is an issue with Diamond or a setting I can change locally. 

Thanks!

[Kabir Peay]

Never mind - figured out that this was just a problem related to the log-in node environment I was running the commands from on our cluster.