During installation: Test #1: unit_tests failed

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Delong ZHOU

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Apr 9, 2018, 11:05:25 AM4/9/18
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Hello,
I'm trying to install the latest version of Salmon 0.9.1
I followed the instruction and at the end of this step:
$ make install
I saw the message:

<<Installation complete. Please ensure the following paths are set properly.>>

So I edited and sourced my .zshrc.
I did a echo to make sure the pathes are correctly edited.
Then I did
$ make test
which failed with this message:

Running tests...
Test project /home/delong/salmon-0.9.1/build
    Start 1: unit_tests
1/3 Test #1: unit_tests .......................***Failed    0.24 sec
    Start 2: salmon_read_test_fmd
2/3 Test #2: salmon_read_test_fmd .............   Passed    0.97 sec
    Start 3: salmon_read_test_quasi
3/3 Test #3: salmon_read_test_quasi ...........   Passed    0.85 sec

67% tests passed, 1 tests failed out of 3

Total Test time (real) =   2.07 sec

The following tests FAILED:
          1 - unit_tests (Failed)
Errors while running CTest
make: *** [test] Error 8

Rob

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Apr 9, 2018, 11:10:12 AM4/9/18
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Hi Delong,

  Thanks for reporting this.  Indeed, there was a  (stochastic) error in one of the unit tests, which has been resolved in the develop branch (and will be fixed in the next release).  However, despite the error in the unit test, the code being tested is, itself fine.  It is safe to ignore that failed unit test.

Best,
Rob

Delong ZHOU

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Apr 9, 2018, 11:13:17 AM4/9/18
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OK thanks!
Delong
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