Sage 5.1 compilation problems (iconv-1.13.1.p3)
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Rob McMahon
Jul 13, 2012, 7:08:36 AM7/13/12
to sage-...@googlegroups.com
Trying to compile sage-5.1 on Solaris 10 5/09 s10s_u7wos_08 SPARC, gcc (GCC) 4.4.2. iconv-1.13.1.p3 won't compile with the error:
libtool: link: gcc -g -O2 iconv.o -o iconv ../srclib/libicrt.a /home/unit/cu/dcv/src/local/sage-5.1/local/lib/libiconv.so /usr/local/gnu/lib/libintl.so -L/usr/local/lib /usr/local/gnu/lib/libiconv.so -lc -R/home/unit/cu/dcv/src/local/sage-5.1/local/lib -R/usr/local/gnu/lib -R/home/unit/cu/dcv/src/local/sage-5.1/local/lib -R/usr/local/gnu/lib
ld: fatal: recording name conflict: file `/home/unit/cu/dcv/src/local/sage-5.1/local/lib/libiconv.so' and file `/usr/local/gnu/lib/libiconv.so' provide identical dependency names: libiconv.so.2 (possible multiple inclusion of the same file)
ld: fatal: File processing errors. No output written to iconv
collect2: ld returned 1 exit status
Note that it is indeed trying to include two versions of libiconv.so, the installed one from /usr/local/gnu/lib, and the one built from within sage. If it had just used -L/home/unit/cu/dcv/src/local/sage-5.1/local/lib -L/usr/local/gnu/lib -liconv instead, all would have been well.
Relevant parts of the log file:
...
****************************************************
Host system:
SunOS mimosa 5.10 Generic_141444-09 sun4v sparc SUNW,SPARC-Enterprise-T5220 Solaris
****************************************************
C compiler: gcc
C compiler version:
Using built-in specs.
Target: sparc-sun-solaris2.10
Configured with: ../gcc-4.4.2/configure --prefix=/usr/local/gnu --with-gmp=/usr/local
Thread model: posix
gcc version 4.4.2 (GCC)
****************************************************
iconv will be installed as the operating system is Cygwin, HP-UX or Solaris.
These systems either lack iconv, or do not have a sufficiently capable
version of iconv. See:
http://trac.sagemath.org/sage_trac/ticket/8567
http://trac.sagemath.org/sage_trac/ticket/9603
...
libtool: link: gcc -g -O2 iconv.o -o iconv ../srclib/libicrt.a /home/unit/cu/dcv/src/local/sage-5.1/local/lib/libiconv.so /usr/local/g
nu/lib/libintl.so -L/usr/local/lib /usr/local/gnu/lib/libiconv.so -lc -R/home/unit/cu/dcv/src/local/sage-5.1/local/lib -R/usr/local/gnu
/lib -R/home/unit/cu/dcv/src/local/sage-5.1/local/lib -R/usr/local/gnu/lib
ld: fatal: recording name conflict: file `/home/unit/cu/dcv/src/local/sage-5.1/local/lib/libiconv.so' and file `/usr/local/gnu/lib/libi
conv.so' provide identical dependency names: libiconv.so.2 (possible multiple inclusion of the same file)
ld: fatal: File processing errors. No output written to iconv
collect2: ld returned 1 exit status
gmake[3]: *** [install] Error 1
gmake[3]: Leaving directory `/home/unit/cu/dcv/src/local/sage-5.1/spkg/build/iconv-1.13.1.p3/src/src'
gmake[2]: *** [install] Error 2
gmake[2]: Leaving directory `/home/unit/cu/dcv/src/local/sage-5.1/spkg/build/iconv-1.13.1.p3/src'
Error installing iconv
How do I get it to skip this package, and carry on ? I'm pretty confident the system libiconv.so would work.
Cheers,
Rob
libtool: link: gcc -g -O2 iconv.o -o iconv ../srclib/libicrt.a /home/unit/cu/dcv/src/local/sage-5.1/local/lib/libiconv.so /usr/local/gnu/lib/libintl.so -L/usr/local/lib /usr/local/gnu/lib/libiconv.so -lc -R/home/unit/cu/dcv/src/local/sage-5.1/local/lib -R/usr/local/gnu/lib -R/home/unit/cu/dcv/src/local/sage-5.1/local/lib -R/usr/local/gnu/lib
ld: fatal: recording name conflict: file `/home/unit/cu/dcv/src/local/sage-5.1/local/lib/libiconv.so' and file `/usr/local/gnu/lib/libiconv.so' provide identical dependency names: libiconv.so.2 (possible multiple inclusion of the same file)
ld: fatal: File processing errors. No output written to iconv
collect2: ld returned 1 exit status
Note that it is indeed trying to include two versions of libiconv.so, the installed one from /usr/local/gnu/lib, and the one built from within sage. If it had just used -L/home/unit/cu/dcv/src/local/sage-5.1/local/lib -L/usr/local/gnu/lib -liconv instead, all would have been well.
Relevant parts of the log file:
...
****************************************************
Host system:
SunOS mimosa 5.10 Generic_141444-09 sun4v sparc SUNW,SPARC-Enterprise-T5220 Solaris
****************************************************
C compiler: gcc
C compiler version:
Using built-in specs.
Target: sparc-sun-solaris2.10
Configured with: ../gcc-4.4.2/configure --prefix=/usr/local/gnu --with-gmp=/usr/local
Thread model: posix
gcc version 4.4.2 (GCC)
****************************************************
iconv will be installed as the operating system is Cygwin, HP-UX or Solaris.
These systems either lack iconv, or do not have a sufficiently capable
version of iconv. See:
http://trac.sagemath.org/sage_trac/ticket/8567
http://trac.sagemath.org/sage_trac/ticket/9603
...
libtool: link: gcc -g -O2 iconv.o -o iconv ../srclib/libicrt.a /home/unit/cu/dcv/src/local/sage-5.1/local/lib/libiconv.so /usr/local/g
nu/lib/libintl.so -L/usr/local/lib /usr/local/gnu/lib/libiconv.so -lc -R/home/unit/cu/dcv/src/local/sage-5.1/local/lib -R/usr/local/gnu
/lib -R/home/unit/cu/dcv/src/local/sage-5.1/local/lib -R/usr/local/gnu/lib
ld: fatal: recording name conflict: file `/home/unit/cu/dcv/src/local/sage-5.1/local/lib/libiconv.so' and file `/usr/local/gnu/lib/libi
conv.so' provide identical dependency names: libiconv.so.2 (possible multiple inclusion of the same file)
ld: fatal: File processing errors. No output written to iconv
collect2: ld returned 1 exit status
gmake[3]: *** [install] Error 1
gmake[3]: Leaving directory `/home/unit/cu/dcv/src/local/sage-5.1/spkg/build/iconv-1.13.1.p3/src/src'
gmake[2]: *** [install] Error 2
gmake[2]: Leaving directory `/home/unit/cu/dcv/src/local/sage-5.1/spkg/build/iconv-1.13.1.p3/src'
Error installing iconv
How do I get it to skip this package, and carry on ? I'm pretty confident the system libiconv.so would work.
Cheers,
Rob
Volker Braun
Jul 13, 2012, 9:01:04 AM7/13/12
to sage-...@googlegroups.com
I think the only working way to build Sage on SPARC Solaris is to use GCC + Sun ld. You seem to have gcc compiled with the gnu linker, which has various issues on SPARC. See also
Rob McMahon
Jul 13, 2012, 9:59:45 AM7/13/12
to sage-...@googlegroups.com
On Friday, July 13, 2012 7:08:36 AM UTC-4, Rob McMahon wrote:Trying to compile sage-5.1 on Solaris 10 5/09 s10s_u7wos_08 SPARC, gcc (GCC) 4.4.2. iconv-1.13.1.p3 won't compile with the error:
libtool: link: gcc -g -O2 iconv.o -o iconv ../srclib/libicrt.a /home/unit/cu/dcv/src/local/sage-5.1/local/lib/libiconv.so /usr/local/gnu/lib/libintl.so -L/usr/local/lib /usr/local/gnu/lib/libiconv.so -lc -R/home/unit/cu/dcv/src/local/sage-5.1/local/lib -R/usr/local/gnu/lib -R/home/unit/cu/dcv/src/local/sage-5.1/local/lib -R/usr/local/gnu/lib
ld: fatal: recording name conflict: file `/home/unit/cu/dcv/src/local/sage-5.1/local/lib/libiconv.so' and file `/usr/local/gnu/lib/libiconv.so' provide identical dependency names: libiconv.so.2 (possible multiple inclusion of the same file)
ld: fatal: File processing errors. No output written to iconv
collect2: ld returned 1 exit status
I notice this in
.../sage-5.1/spkg/build/iconv-1.13.1.p3/src/src/Makefile
# We cannot link with libintl until libiconv is installed. (When we call
# libtool with arguments "../lib/libiconv.la -lintl", libtool will call ld
# with "../lib/.libs/libiconv.so $libdir/libintl.so $libdir/libiconv.so",
# (remember that $libdir/libintl.la lists $libdir/libiconv.so as a dependency),
# and this gives a fatal linker error on Solaris because the two libiconv.so
# files are different but have the same soname.
# So we can link the iconv executable only after we have installed libiconv,
# i.e. during "make install". The intermediate 'iconv' executable is built
# without internationalization and not linked with libintl.
This is exactly what I'm seeing.
Rob
# We cannot link with libintl until libiconv is installed. (When we call
# libtool with arguments "../lib/libiconv.la -lintl", libtool will call ld
# with "../lib/.libs/libiconv.so $libdir/libintl.so $libdir/libiconv.so",
# (remember that $libdir/libintl.la lists $libdir/libiconv.so as a dependency),
# and this gives a fatal linker error on Solaris because the two libiconv.so
# files are different but have the same soname.
# So we can link the iconv executable only after we have installed libiconv,
# i.e. during "make install". The intermediate 'iconv' executable is built
# without internationalization and not linked with libintl.
This is exactly what I'm seeing.
Rob
-- E-Mail: Rob.M...@warwick.ac.uk PHONE: +44 24 7652 3037 Rob McMahon, IT Services, Warwick University, Coventry, CV4 7AL, England
Rob McMahon
Jul 13, 2012, 9:25:35 AM7/13/12
to sage-...@googlegroups.com
On 13/07/2012 14:01, Volker Braun wrote:
I think the only working way to build Sage on SPARC Solaris is to use GCC + Sun ld. You seem to have gcc compiled with the gnu linker, which has various issues on SPARC. See also
I definitely don't. I've always avoided GNU as & ld, and I did
read that page. Here's a compilation of a little test file:
> gcc -v c.c
> gcc -v c.c
Using built-in specs.
Target: sparc-sun-solaris2.10
Configured with: ../gcc-4.4.2/configure --prefix=/usr/local/gnu --with-gmp=/usr/local
Thread model: posix
gcc version 4.4.2 (GCC)
COLLECT_GCC_OPTIONS='-v' '-mcpu=v9'
/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/4.4.2/cc1 -quiet -v -D__sparcv8 c.c -quiet -dumpbase c.c -mcpu=v9 -auxbase c -version -o /var/tmp//ccOblGgT.s
ignoring nonexistent directory "/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/../../../../sparc-sun-solaris2.10/include"
#include "..." search starts here:
#include <...> search starts here:
/usr/local/include
/usr/local/gnu/include
/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/include
/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/include-fixed
/usr/include
End of search list.
GNU C (GCC) version 4.4.2 (sparc-sun-solaris2.10)
compiled by GNU C version 4.4.2, GMP version 4.3.1, MPFR version 2.4.1.
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
Compiler executable checksum: 638e7f856fcc294126213f11e11eedd0
COLLECT_GCC_OPTIONS='-v' '-mcpu=v9'
/usr/ccs/bin/as -V -Qy -s -xarch=v8plus -o /var/tmp//ccuANRWI.o /var/tmp//ccOblGgT.s
/usr/ccs/bin/as: SunOS 5.10 118683-05 Patch 04/30/2010
COMPILER_PATH=/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/:/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/:/usr/ccs/bin/
LIBRARY_PATH=/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/ccs/lib/:/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/../../../:/lib/:/usr/lib/
COLLECT_GCC_OPTIONS='-v' '-mcpu=v9'
/usr/ccs/bin/as -V -Qy -s -xarch=v8plus -o /var/tmp//ccuANRWI.o /var/tmp//ccOblGgT.s
/usr/ccs/bin/as: SunOS 5.10 118683-05 Patch 04/30/2010
COMPILER_PATH=/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/:/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/:/usr/ccs/bin/
LIBRARY_PATH=/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/ccs/lib/:/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/../../../:/lib/:/usr/lib/
COLLECT_GCC_OPTIONS='-v' '-mcpu=v9'
/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/4.4.2/collect2 -V -Y P,/usr/ccs/lib:/usr/lib -Qy /usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/crt1.o /usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/crti.o /usr/ccs/lib/values-Xa.o /usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/crtbegin.o -L/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2 -L/usr/ccs/lib -L/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/../../.. /var/tmp//ccuANRWI.o -lgcc -lgcc_eh -lc -lgcc -lgcc_eh -lc /usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/crtend.o /usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/crtn.o
ld: Software Generation Utilities - Solaris Link Editors: 5.10-1.497
/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/4.4.2/cc1 -quiet -v -D__sparcv8 c.c -quiet -dumpbase c.c -mcpu=v9 -auxbase c -version -o /var/tmp//ccOblGgT.s
ignoring nonexistent directory "/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/../../../../sparc-sun-solaris2.10/include"
#include "..." search starts here:
#include <...> search starts here:
/usr/local/include
/usr/local/gnu/include
/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/include
/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/include-fixed
/usr/include
End of search list.
GNU C (GCC) version 4.4.2 (sparc-sun-solaris2.10)
compiled by GNU C version 4.4.2, GMP version 4.3.1, MPFR version 2.4.1.
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
Compiler executable checksum: 638e7f856fcc294126213f11e11eedd0
COLLECT_GCC_OPTIONS='-v' '-mcpu=v9'
/usr/ccs/bin/as -V -Qy -s -xarch=v8plus -o /var/tmp//ccuANRWI.o /var/tmp//ccOblGgT.s
/usr/ccs/bin/as: SunOS 5.10 118683-05 Patch 04/30/2010
COMPILER_PATH=/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/:/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/:/usr/ccs/bin/
LIBRARY_PATH=/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/ccs/lib/:/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/../../../:/lib/:/usr/lib/
COLLECT_GCC_OPTIONS='-v' '-mcpu=v9'
/usr/ccs/bin/as -V -Qy -s -xarch=v8plus -o /var/tmp//ccuANRWI.o /var/tmp//ccOblGgT.s
/usr/ccs/bin/as: SunOS 5.10 118683-05 Patch 04/30/2010
COMPILER_PATH=/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/:/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/:/usr/ccs/bin/
LIBRARY_PATH=/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/:/usr/ccs/lib/:/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/../../../:/lib/:/usr/lib/
COLLECT_GCC_OPTIONS='-v' '-mcpu=v9'
/usr/local/gnu/libexec/gcc/sparc-sun-solaris2.10/4.4.2/collect2 -V -Y P,/usr/ccs/lib:/usr/lib -Qy /usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/crt1.o /usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/crti.o /usr/ccs/lib/values-Xa.o /usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/crtbegin.o -L/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2 -L/usr/ccs/lib -L/usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/../../.. /var/tmp//ccuANRWI.o -lgcc -lgcc_eh -lc -lgcc -lgcc_eh -lc /usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/crtend.o /usr/local/gnu/lib/gcc/sparc-sun-solaris2.10/4.4.2/crtn.o
ld: Software Generation Utilities - Solaris Link Editors: 5.10-1.497
On Friday, July 13, 2012 7:08:36 AM UTC-4, Rob McMahon wrote:Trying to compile sage-5.1 on Solaris 10 5/09 s10s_u7wos_08 SPARC, gcc (GCC) 4.4.2. iconv-1.13.1.p3 won't compile with the error:
libtool: link: gcc -g -O2 iconv.o -o iconv ../srclib/libicrt.a /home/unit/cu/dcv/src/local/sage-5.1/local/lib/libiconv.so /usr/local/gnu/lib/libintl.so -L/usr/local/lib /usr/local/gnu/lib/libiconv.so -lc -R/home/unit/cu/dcv/src/local/sage-5.1/local/lib -R/usr/local/gnu/lib -R/home/unit/cu/dcv/src/local/sage-5.1/local/lib -R/usr/local/gnu/lib
ld: fatal: recording name conflict: file `/home/unit/cu/dcv/src/local/sage-5.1/local/lib/libiconv.so' and file `/usr/local/gnu/lib/libiconv.so' provide identical dependency names: libiconv.so.2 (possible multiple inclusion of the same file)
ld: fatal: File processing errors. No output written to iconv
collect2: ld returned 1 exit status
Jeroen Demeyer
Jul 13, 2012, 10:35:22 AM7/13/12
to sage-...@googlegroups.com
On 2012-07-13 13:08, Rob McMahon wrote:
> How do I get it to skip this package, and carry on ?
$ touch spkg/installed/iconv-1.13.1.p3
> How do I get it to skip this package, and carry on ?
$ make
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