Vmax --units

10 views
Skip to first unread message

Deepa Maheshvare

unread,
Jan 15, 2018, 9:53:46 AM1/15/18
to SABIO-RK
Hi,
I would like to ask for some clarification in the units of Vmax.In most of the entries,the units of Vmax is gives as U/mg(eg. entry 2919). Here,mg is mg of enzyme or mg of tissue?

Many thanks for your time and kind consideration
Deepa

Ulrike Wittig

unread,
Jan 15, 2018, 10:52:24 AM1/15/18
to SABIO-RK
Hi Deepa,
in your example the unit refers to mg purified protein.
In general the units for Vmax should refer to the mg of protein in the assay.
If cell extracts or tissues are used or dependent on the purity of the protein in the assay of course different proteins could be included in the weight.

Regards,
Ulrike

Deepa Maheshvare

unread,
Jan 15, 2018, 11:51:33 AM1/15/18
to Ulrike Wittig, SABIO-RK
Hi Ulrike,
Thank you so much for the explanation.I would like to ask for one more advice.For the cases in which the units of Vmax is given in per gram dry weight of tissue ,is there a way to convert the quantity into per gram of enzyme?
I have seen models where per gram of tissue is considered equivalent to per ml of tissue.Would this be a right substitution?

Thanks a lot for your kind consideration
Deepa

--
You received this message because you are subscribed to the Google Groups "SABIO-RK" group.
To unsubscribe from this group and stop receiving emails from it, send an email to sabio-rk+unsubscribe@googlegroups.com.
To post to this group, send email to sabi...@googlegroups.com.
Visit this group at https://groups.google.com/group/sabio-rk.
To view this discussion on the web visit https://groups.google.com/d/msgid/sabio-rk/30409937-cb86-47ad-8215-84956f3b6b29%40googlegroups.com.
For more options, visit https://groups.google.com/d/optout.

Ulrike Wittig

unread,
Jan 16, 2018, 3:35:49 AM1/16/18
to SABIO-RK
Hi Deepa,
it's not correct to just set per gram of tissue equivalent to per ml of tissue. And there is no way to automatically convert per gram of tissue into per gram of enzyme.

regards,
Ulrike

Matthias König

unread,
Jan 17, 2018, 10:00:41 AM1/17/18
to SABIO-RK
Just to add.

it's not correct to just set per gram of tissue equivalent to per ml of tissue.
This is true, but most tissues have a density of close to 1g/ml, so using this conversion factors the numerical values are the same.
and the rates in per_g are ~ the rates in per_ml. 

See for instance adipose tissue density of 0.92 g/ml
http://bionumbers.hms.harvard.edu/bionumber.aspx?&id=111213&ver=0&trm=tissue%20density

density of skeletal muscle 1.06 g/ml
http://bionumbers.hms.harvard.edu/bionumber.aspx?&id=111214&ver=1&trm=tissue%20density

Liver is also around 1.00, so pancreas you are interested in is also in the range.
Best M
To unsubscribe from this group and stop receiving emails from it, send an email to sabio-rk+u...@googlegroups.com.
Reply all
Reply to author
Forward
0 new messages