When executed, the OCRA stub extracts the Ruby interpreter and your scripts into a temporary directory. The directory will contains the same directory layout as your Ruby installlation. The source files for your application will be put in the ‘src’ subdirectory.
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The nature of ruby makes it very difficult to conceal your program's source code if you distribute it to your users. You could, at best, and after a great deal of annoying work, create an obfuscation scheme that would slow down a developer trying to figure out your app for maybe a few days, less if they've done reverse engineering before.
If keeping your source code secret is important, then implement your app as a web service, not a standalone desktop application.
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