Error during KEA creation

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Nathan Thomas

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Apr 1, 2019, 1:04:44 PM4/1/19
to RSGISLib Support

Hi, I have started getting this error recently when trying to convert GDAL formats to KEA. Amy advice on how to fix this?


Thanks, Nathan



Warning! ***HDF5 library version mismatched error***

The HDF5 header files used to compile this application do not match

the version used by the HDF5 library to which this application is linked.

Data corruption or segmentation faults may occur if the application continues.

This can happen when an application was compiled by one version of HDF5 but

linked with a different version of static or shared HDF5 library.

You should recompile the application or check your shared library related

settings such as 'LD_LIBRARY_PATH'.

You can, at your own risk, disable this warning by setting the environment

variable 'HDF5_DISABLE_VERSION_CHECK' to a value of '1'.

Setting it to 2 or higher will suppress the warning messages totally.

Headers are 1.10.3, library is 1.10.4

    SUMMARY OF THE HDF5 CONFIGURATION

    =================================


General Information:

-------------------

                   HDF5 Version: 1.10.4

                  Configured on: Fri Nov 30 19:14:36 CST 2018

                  Configured by: kyng...@Sumomo.attlocal.net

                    Host system: x86_64-apple-darwin16.7.0

              Uname information: Darwin Sumomo.attlocal.net 16.7.0 Darwin Kernel Version 16.7.0: Wed Oct 10 20:06:00 PDT 2018; root:xnu-3789.73.24~1/RELEASE_X86_64 x86_64

                       Byte sex: little-endian

             Installation point: /Users/Shared/unix/hdf-elcap


Compiling Options:

------------------

                     Build Mode: production

              Debugging Symbols: no

                        Asserts: no

                      Profiling: no

             Optimization Level: high


Linking Options:

----------------

                      Libraries: static

  Statically Linked Executables: 

                        LDFLAGS: 

                     H5_LDFLAGS: 

                     AM_LDFLAGS:  -L/Users/Shared/unix/hdf-elcap/lib

                Extra libraries: -lpthread -lsz -lz -ldl -lm 

                       Archiver: ar

                       AR_FLAGS: cr

                         Ranlib: ranlib


Languages:

----------

                              C: yes

                     C Compiler: /usr/bin/clang ( Apple LLVM version 8.0.0 )

                       CPPFLAGS: 

                    H5_CPPFLAGS:   -DNDEBUG -UH5_DEBUG_API

                    AM_CPPFLAGS:  -I/Users/Shared/unix/hdf-elcap/include

                        C Flags: -Os -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.12.sdk

                     H5 C Flags:     

                     AM C Flags: 

               Shared C Library: no

               Static C Library: yes



                        Fortran: no


                            C++: yes

                   C++ Compiler: /usr/bin/clang++ ( Apple LLVM version 8.0.0 )

                      C++ Flags: -Os -std=c++11 -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.12.sdk

                   H5 C++ Flags:    

                   AM C++ Flags: 

             Shared C++ Library: no

             Static C++ Library: yes


                           Java: no



Features:

---------

                   Parallel HDF5: no

Parallel Filtered Dataset Writes: no

              Large Parallel I/O: no

              High-level library: yes

                    Threadsafety: yes

             Default API mapping: v110

  With deprecated public symbols: yes

          I/O filters (external): deflate(zlib),szip(no encoder)

                             MPE: no

                      Direct VFD: no

                         dmalloc: no

  Packages w/ extra debug output: none

                     API tracing: no

            Using memory checker: no

 Memory allocation sanity checks: no

             Metadata trace file: no

          Function stack tracing: no

       Strict file format checks: no

    Optimization instrumentation: no

Bye...

Abort trap: 6


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