Hi all,
RSEM v1.2.1 is online now.
- Added poly(A) tails to 'reference_name.transcripts.fa' so that the RSEM
generated transcript unsorted BAM file can be fed into RSEM as an input
file. However, users need to rebuild their references if they want to
visualize the transcript level wiggle files and BAM files using IGV
- Modified 'rsem-tbam2gbam' to convert users' alignments from transcript
BAM files into genome BAM files, provided users use
'reference_name.idx.fa' to build indices for their aligners
- Updated EBSeq from v1.1.3 to v1.1.4
- Corrected several typos in warning messages
You can find the source codes here
http://deweylab.biostat.wisc.edu/rsem/
Best,
Bo