rseg segmentation fault core dumped

[cc1...@essex.ac.uk]

I am interested in using your package- 'rseg' for differential peak calling between treated and control read files that I have.

I seem to be having some trouble with it:

Although I'm told that everything installed fine it doesn't seem to work:

I have two sam files (which I converted to bed files) 

and I also have a file that specifies the size of the chromosomes as follows:

chrom   size

chr1    197195432

chr2    181748087

chr3    159599783

chr4    155630120

chr5    152537259

chr6    149517037

chr7    152524553

chr8    131738871

chr9    124076172

chr10   129993255

chr11   121843856

chr12   121257530

chr13   120284312

chr14   125194864

chr15   103494974

chr16   98319150

chr17   95272651

chr18   90772031

chr19   61342430

chrX    166650296

chrY    15902555

chrM    16299

chr13_random    400311

chr16_random    3994

chr17_random    628739

chr1_random     1231697

chr3_random     41899

chr4_random     160594

chr5_random     357350

chr7_random     362490

 

chr8_random     849593

NOTE: I should mention that in the documentation, it is not at all clear how the actual input files are specified i.e. the treated and control BED files. Should they be precluded by '-input' and -control'?

However while everything seems to be in order I get an error:

rseg-diff -c ~/mm9.genome -o out.bed -i 20 -v -mode 2  test.bed control.bed  #-c the last two arguments are the input treated and control files

Error:

[LOADING_DATA] chromosomes

[LOADING_DATA] reads

Segmentation fault (core dumped)