R/qtl version 0.44
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Karl Broman
Jul 6, 2026, 3:54:58 PM (2 days ago) Jul 6
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A new version of R/qtl2 (version 0.44) has been released on CRAN. Windows and Mac binaries will be available within a few days.
Here are the changes:
- Added a general genome scan function scan1gen which takes as input an R function that calculates the log10 likelihood.
- Added ability to use scan1perm with an alternative scan function such as scan1gen or scan1snps.
- Potential speed-up of scan1() and scan1perm(): the eigen library has implemented least squares regression with multivariate outcomes.
- For parallel computing, use of cores=0 argument now results in all but one core rather than all cores.
Karl Broman
Here are the changes:
- Added a general genome scan function scan1gen which takes as input an R function that calculates the log10 likelihood.
- Added ability to use scan1perm with an alternative scan function such as scan1gen or scan1snps.
- Potential speed-up of scan1() and scan1perm(): the eigen library has implemented least squares regression with multivariate outcomes.
- For parallel computing, use of cores=0 argument now results in all but one core rather than all cores.
Karl Broman
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