The unique identifier for the genotypes, "Genotype", cannot be found in the object

[Miguel Macias]

Hello folks,

Has anyone ran into this problem. I can read the .csv file and read my cross data but it will not make or read unique identifiers for the genotypes.

This causes problems later on, because I cannot use any functions including profileGen(), statGen(), etc.

I tried assigning unique identifiers by using 

row.names(hap$geno$`1`$data) <- hap$pheno$ï..Genotype

Where:

hap = is the name of the cross object

Genotype in hap$pheno = the unique identifier for my genotype

'1' = All the genotype data in one linkage group (no ordering of markers have been done)

Please let me know if you know the solution to this problem, thank you.

Kind Regards,

Miguel

[Karl Broman]

What package are you referring to? I’m not familiar with profileGen() and statGen().

karl

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