How do I set object 'defaultGuider' for part 4 analysis using development version of GGIR

[Daan de groot]

Hi all,

Thank you for taking the time to look at my question!

I am using  dataFormat "actiwatch_csv" with a sleep guider CSV. I validated my Guider csv via a different data format and there it works. Also my code works without the CSV guider.

When I run my code I get the error:

Error in g.part4(datadir = datadir, metadatadir = metadatadir, f0 = f0, : object 'defaultGuider' not found

My part 4 config is:

  loglocation = "D:/GGIR/ruweData/slaaplogboek.csv",
  colid = 1,                      
  coln1 = 2,                     
  relyonguider=FALSE, 
  sleepwindowType = "TimeInBed",  
  sleepefficiency.metric=1,       

  idloc = 2,            
  HASIB.algo = "ColeKripke1992",  
  do.zcy = TRUE,                  
  Sadeh_axis = "Y",              

  acc.metric = "ZCY",             
  ignorenonwear = FALSE,    
  def.noc.sleep = c(1),          
  sleeplogidnum = TRUE,          
  HASPT.algo="HDCZA",              
  do.visual = TRUE,           
  outliers.only = TRUE,     
  criterror = 4,              

How can I configure the defaultGuider? 

[Jairo Hidalgo Migueles]

Hi,

Can you re-run part 3 with mode = 3 and overwrite = TRUE and let me know if that solves the issue? If the issue is still there, would you be able to share an actiwatch_csv file with me to have a look at this?

Best,
Jairo

[wang xc]

I got the same error as Daan, and tried with wht Jairo suggested, did not solve the issue. my data is in this link https://groups.google.com/g/RpackageGGIR/c/tbctnEX3QyY/m/mY5uAXekAAAJ

[Vincent van Hees]

Hi

I have prepared a fix for this issue. I will ask Jairo to double check, but if you want to use the test version you could do so with: 

remotes::install_github("wadpac/GGIR", ref = "issue1095_defaultGuider")

The issue was introduced in GGIR 3.0-7.

Best, Vincent

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[wang xc]

thanks,Vincent, I updated with the issue1095, that error does not show up anymore.