Error in running roast in mac
Irtisha Chakraborty
Hi,
I have been trying to run the ROAST on Mac but getting errors in 5th step. It's showing something related to the Python version, which I supposed was changed after 2019 or 2020 on Mac. I want to know if this is the issue or anything else. I have tried changing the getdp version, but it still has the same issue.
Thank you
Regards,
Irtisha
>> roast
=============================================================
ROAST is an aggregated work by Yu (Andy) Huang licensed under
General Public License version 3 or later. It's supported by
both NIH grants and Soterix Medical Inc.
=============================================================
======================================================
CHECKING INPUTS...
======================================================
Warning: Input MRI example/MNI152_T1_1mm.nii is not in RAS orientation, and has been
re-oriented into RAS and saved as example/MNI152_T1_1mm_ras.nii. ROAST will use that file as
the input.
======================================================
ROAST example/MNI152_T1_1mm.nii
USING RECIPE:
Fp1 (1 mA), P4 (-1 mA)
...and simulation options saved in:
example/MNI152_T1_1mm_roastLog,
under tag: 20230629T144739
======================================================
======================================================
MRI ALREADY SEGMENTED, SKIP STEP 1
======================================================
======================================================
SEGMENTATION TOUCHUP ALREADY DONE, SKIP STEP 2
======================================================
======================================================
ELECTRODE ALREADY PLACED, SKIP STEP 3
======================================================
======================================================
MESH ALREADY GENERATED, SKIP STEP 4
======================================================
======================================================
STEP 5 (out of 6): SOLVING THE MODEL...
======================================================
dyld[10076]: Library not loaded: /System/Library/Frameworks/Python.framework/Versions/2.7/Python
Referenced from: <C2BA6604-E164-3A03-9C1B-9C01D3AF250A> /Users/neuromodulationnimhans/Documents/NIMHANS/Imaging_and_stimulation/roast-master/lib/getdp-3.2.0/bin/getdpMac
Reason: tried: '/System/Library/Frameworks/Python.framework/Versions/2.7/Python' (no such file), '/System/Volumes/Preboot/Cryptexes/OS/System/Library/Frameworks/Python.framework/Versions/2.7/Python' (no such file), '/System/Library/Frameworks/Python.framework/Versions/2.7/Python' (no such file, not in dyld cache), '/Library/Frameworks/Python.framework/Versions/2.7/Python' (no such file)
lib/getdp-3.2.0/bin/getdpMac "example/MNI152_T1_1mm_20230629T144739.pro" -solve EleSta_v -msh "example/MNI152_T1_1mm_20230629T144739_ready.msh" -pos Map: Aborted
Error using solveByGetDP
getDP solver cannot work properly on your system. Please check any error message you got.
Error in roast (line 845)
solveByGetDP(subj,injectCurrent,conductivities,indElecSolve,uniqueTag,'');