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Happy ROASTing!
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Abdülbaki YÜCEL
,
Yu (Andy) Huang
2
Mar 18
Normal component
ROAST cannot output normal components, but you can use the surface mesh to calculate the normal
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Normal component
ROAST cannot output normal components, but you can use the surface mesh to calculate the normal
Mar 18
Sydney Winokur
,
Yu (Andy) Huang
6
11/21/24
Output images matching the parameters
I figured out what the issue was. ROAST was not reading the parameters I was setting. Had to ass more
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Output images matching the parameters
I figured out what the issue was. ROAST was not reading the parameters I was setting. Had to ass more
11/21/24
橘子
,
Yu (Andy) Huang
2
10/22/24
Problem with loading results in HD-Explore
Please note that Soterix software is only compatible with ROAST v3.0, not the latest version of v3.5.
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Problem with loading results in HD-Explore
Please note that Soterix software is only compatible with ROAST v3.0, not the latest version of v3.5.
10/22/24
橘子
,
Yu (Andy) Huang
2
10/19/24
Inquiry About MNI Coordinates and Electromagnetic Field Intensity in ROAST
Not sure what you mean by "standardized". The E-field is always output in the native space
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Inquiry About MNI Coordinates and Electromagnetic Field Intensity in ROAST
Not sure what you mean by "standardized". The E-field is always output in the native space
10/19/24
Enock Boakye
,
Yu (Andy) Huang
2
10/19/24
Extracting current density and conductivity distributions.
Hi Enock, roast assumes isotropic and homogeneous tissues in the head, so conductivity for each
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Extracting current density and conductivity distributions.
Hi Enock, roast assumes isotropic and homogeneous tissues in the head, so conductivity for each
10/19/24
Abdülbaki YÜCEL
,
Yu (Andy) Huang
2
9/21/24
change scaling
Hi, you can use caxis() to adjust the color axis. Hope this helps On Wed, Sep 18, 2024 at 7:04 AM
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change scaling
Hi, you can use caxis() to adjust the color axis. Hope this helps On Wed, Sep 18, 2024 at 7:04 AM
9/21/24
Jake E Toth
9/13/24
Re: [roast-users] Help with Converting Electric Field Magnitudes to MNI Coordinates in ROAST
Hi Norlan, To translate from native space to MNI space with an affine transform you can use "
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Re: [roast-users] Help with Converting Electric Field Magnitudes to MNI Coordinates in ROAST
Hi Norlan, To translate from native space to MNI space with an affine transform you can use "
9/13/24
Grace Guo
,
Yu (Andy) Huang
2
7/24/24
Information of Subject 1
No, subject 1 was not used for NY head. On Wed, Jul 24, 2024 at 11:47 AM Grace Guo <yuxinguo@
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Information of Subject 1
No, subject 1 was not used for NY head. On Wed, Jul 24, 2024 at 11:47 AM Grace Guo <yuxinguo@
7/24/24
Yu (Andy) Huang
5/15/24
ROAST v3.5 (codename: Dumbo) released
Dear ROAST users, We're glad to release version 3.5 now. You can download it here, and see the
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ROAST v3.5 (codename: Dumbo) released
Dear ROAST users, We're glad to release version 3.5 now. You can download it here, and see the
5/15/24
Mina Mir
,
Yu (Andy) Huang
2
4/30/24
simulating electrode and sponges
Hi Mina, ROAST cannot define the sizes of electrodes and sponges separately, but it can assign
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simulating electrode and sponges
Hi Mina, ROAST cannot define the sizes of electrodes and sponges separately, but it can assign
4/30/24
Abdülbaki YÜCEL
,
Yu (Andy) Huang
2
4/19/24
coding ring electrode
Hi Abdülbaki, looks like the ring electrode is cut off by the image boundary. You can do a
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coding ring electrode
Hi Abdülbaki, looks like the ring electrode is cut off by the image boundary. You can do a
4/19/24
Evelyne Fraats
,
Yu (Andy) Huang
2
4/13/24
Voltage in Stimulation specific slice selection
Hi Evelyne, unfortunately that's not possible now. But we will release a new version soon which
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Voltage in Stimulation specific slice selection
Hi Evelyne, unfortunately that's not possible now. But we will release a new version soon which
4/13/24
Yu (Andy) Huang
,
Tomoya Gyoda
2
1/30/24
Re: [roast-users] Error at the third step
Hi, Thank you for helping me. As Yu suggested, when I moved T1.nii to a different folder, it worked
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Re: [roast-users] Error at the third step
Hi, Thank you for helping me. As Yu suggested, when I moved T1.nii to a different folder, it worked
1/30/24
Jiatong He
,
Yu (Andy) Huang
2
1/30/24
export the head model together in .stl format
Unfortunately ROAST does not support stl export. On Mon, Jan 29, 2024 at 11:39 AM Jiatong He <
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export the head model together in .stl format
Unfortunately ROAST does not support stl export. On Mon, Jan 29, 2024 at 11:39 AM Jiatong He <
1/30/24
Molly Brillinger
,
Yu (Andy) Huang
4
11/28/23
Error using caxis/error in visualize Res
maybe try delete everything and download again? It was working fine so I think it should work again.
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Error using caxis/error in visualize Res
maybe try delete everything and download again? It was working fine so I think it should work again.
11/28/23
Rajat Joshi
, …
Yu (Andy) Huang
9
11/24/23
Extract Electric Field Intensity at certain ROI
Hi Marija, yes, what you did is correct. Glad to hear you figured it out! On Mon, Nov 20, 2023 at 1:
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Extract Electric Field Intensity at certain ROI
Hi Marija, yes, what you did is correct. Glad to hear you figured it out! On Mon, Nov 20, 2023 at 1:
11/24/23
Iversen, Kevin D.
,
Yu (Andy) Huang
3
11/7/23
Error When Attempting Mesh Generation on Mac
For anyone who suffers from this issue in the future, the specific solution to changing the
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Error When Attempting Mesh Generation on Mac
For anyone who suffers from this issue in the future, the specific solution to changing the
11/7/23
J M
9/13/23
Error setting property 'CLim' of class 'Axes'
Hallo, my attempt to run the following and similar commands (Windows 10, Matlab 2022) roast('
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Error setting property 'CLim' of class 'Axes'
Hallo, my attempt to run the following and similar commands (Windows 10, Matlab 2022) roast('
9/13/23
Irtisha Chakraborty
7/22/23
Error in running roast in mac
Hi, I have been trying to run the ROAST on Mac but getting errors in 5th step. It's showing
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Error in running roast in mac
Hi, I have been trying to run the ROAST on Mac but getting errors in 5th step. It's showing
7/22/23
Irtisha Chakraborty
,
Jake E Toth
2
7/19/23
error in getdp
Hello, Have you tracked if something else on your system uses a lot of RAM? It could be that if you
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error in getdp
Hello, Have you tracked if something else on your system uses a lot of RAM? It could be that if you
7/19/23
Ruben Sanchez
,
Jake E Toth
2
7/19/23
discrepancy in number of nodes in e.pos file
Hi Ruben, Unfortunately, the mesher used in ROAST (iso2mesh) does not generate the exact same mesh
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discrepancy in number of nodes in e.pos file
Hi Ruben, Unfortunately, the mesher used in ROAST (iso2mesh) does not generate the exact same mesh
7/19/23
Grace Guo
,
Yu (Andy) Huang
6
7/3/23
Modify Mask File
No worries. So you just wanted to correct the segmentation. You can do it in the way you described,
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Modify Mask File
No worries. So you just wanted to correct the segmentation. You can do it in the way you described,
7/3/23
Irtisha Chakraborty
,
Yu (Andy) Huang
2
6/26/23
query regarding Hd electrode modeling using ROAST
Hi Irtisha, You can follow the syntax in this example. Note that if you put negative current, then
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query regarding Hd electrode modeling using ROAST
Hi Irtisha, You can follow the syntax in this example. Note that if you put negative current, then
6/26/23
Grace Edwards
,
Yu (Andy) Huang
5
6/15/23
Custom coordinates - which space?
HI Grace, The problem may be that you did not provide the custom electrode coordinates using the
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Custom coordinates - which space?
HI Grace, The problem may be that you did not provide the custom electrode coordinates using the
6/15/23
Irtisha Chakraborty
,
Yu (Andy) Huang
2
6/6/23
error
Hi Irtisha, Usually we do not put the data files under the same folder of the code. You can move the
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error
Hi Irtisha, Usually we do not put the data files under the same folder of the code. You can move the
6/6/23
Grace Guo
,
Yu (Andy) Huang
2
5/14/23
Mesh Generation
Hi Grace, Yes of course the same mesh could be used for the same MRI. If you change the electrode
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Mesh Generation
Hi Grace, Yes of course the same mesh could be used for the same MRI. If you change the electrode
5/14/23
Joyce Chen
,
Yu (Andy) Huang
2
5/14/23
stroke MRI, segmentation, file organization
Hi Joyce, 1. I am working with MRIs of people with stroke - they have variable lesion sizes, some
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stroke MRI, segmentation, file organization
Hi Joyce, 1. I am working with MRIs of people with stroke - they have variable lesion sizes, some
5/14/23
Joyce Chen
,
Jake E Toth
3
5/10/23
Normalized or Native MRI T1; zeropadding
Hi Jake, Thanks very much! I have a few other questions, but I'll start a new email so that the
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Normalized or Native MRI T1; zeropadding
Hi Jake, Thanks very much! I have a few other questions, but I'll start a new email so that the
5/10/23
Ziqian Huang
,
Grace Guo
3
4/28/23
getDP solver cannot work properly on your system
Hey Grace, Thank you so much for your reply! I will try to update the getDP and try it again. Thank
unread,
getDP solver cannot work properly on your system
Hey Grace, Thank you so much for your reply! I will try to update the getDP and try it again. Thank
4/28/23
Grace Guo
,
Yu (Andy) Huang
3
4/27/23
Electric Field Magnitude for Visualization
Thank you so much! This is very helpful:) On Sunday, April 23, 2023 at 6:27:28 PM UTC-4 andypo...@
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Electric Field Magnitude for Visualization
Thank you so much! This is very helpful:) On Sunday, April 23, 2023 at 6:27:28 PM UTC-4 andypo...@
4/27/23