N_unmapped 9521047 9521047 9521047
N_multimapping 0 0 0
N_noFeature 53548099 53570221 53548309
N_ambiguous 1 0 0
ENSMUSG00000079800.2 0 0 1
ENSMUSG00000095092.1 0 0 0
ENSMUSG00000079192.2 120 1 120
ENSMUSG00000079794.2 2 2 0
ENSMUSG00000094799.1 0 0 0
ENSMUSG00000095250.1 0 0 0
Started job on | May 04 15:01:33
Started mapping on | May 04 15:33:32
Finished on | May 04 17:28:16
Mapping speed, Million of reads per hour | 32.99
Number of input reads | 63091479
Average input read length | 150
UNIQUE READS:
Uniquely mapped reads number | 53570432
Uniquely mapped reads % | 84.91%
Average mapped length | 149.67
Number of splices: Total | 18307132
Number of splices: Annotated (sjdb) | 12310
Number of splices: GT/AG | 18180161
Number of splices: GC/AG | 112361
Number of splices: AT/AC | 14610
Number of splices: Non-canonical | 0
Mismatch rate per base, % | 0.20%
Deletion rate per base | 0.01%
Deletion average length | 1.39
Insertion rate per base | 0.01%
Insertion average length | 1.19
MULTI-MAPPING READS:
Number of reads mapped to multiple loci | 0
% of reads mapped to multiple loci | 0.00%
Number of reads mapped to too many loci | 5338404
% of reads mapped to too many loci | 8.46%
UNMAPPED READS:
% of reads unmapped: too many mismatches | 0.09%
% of reads unmapped: too short | 6.41%
% of reads unmapped: other | 0.13%
CHIMERIC READS:
Number of chimeric reads | 0
% of chimeric reads | 0.00%
May I ask did I do something wrong?
Thank you so much! Any suggestion appreciated!
-Zhen