Process killed

29 views
Skip to first unread message

Labrousse Guillaume

unread,
Feb 7, 2022, 10:47:16 AMFeb 7
to rna-star

Hi everyone,

I am having troubles using STAR in my Ubuntu system. When I am doing the genome index everything is fine when at some point the prossess is killed (here you can see the a spike in the swap memory usage at the same time)

Do you know how I could handle this problem ?
Thank you a lot

rna star ressources.jpegrnastar.png

Alexander Dobin

unread,
Feb 7, 2022, 11:22:37 AMFeb 7
to rna-star
Hi,

this looks like RAM problem.
Please try --limitGenomeGenerateRAM 25000000000

Cheers
Alex

Reply all
Reply to author
Forward
0 new messages