Seamless Xenograft Analysis
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Dario Strbenac
Dec 12, 2023, 12:00:05 AM12/12/23
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Could STARsolo offer a purpose-built mixed-species analysis? For example, it could produce one counts matrix for human and one for mouse in a single command.
Alexander Dobin
Dec 22, 2023, 2:36:12 PM12/22/23
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Yes, if you make a combined "genome" of two species.
The cell/gene matrix will contain the genes from both species.
Some "cells" will contain counts from both species, indicating doublets, mis-mapping, or other issues.
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