Welcome to Google group "exomePeak for RNA epigenetics"

The exomePeak R-package is now available from bioconductor and can be installed with the following R commands:

# Install Rsamtools and exomePeak package

source("http://bioconductor.org/biocLite.R")

biocLite("exomePeak")

User support

The exome R-package is under active development, we welcome any suggestions. Please feel free to contact Dr. Jia Meng (Email: jia.meng@hotmail.com) if you need any help.

Citation

Meng, J.; Cui, X.; Rao, M. K.; Chen, Y.; Huang, Y. (14 April 2013). "Exome-based analysis for RNA epigenome sequencing data". Bioinformatics 29 (12): 1565–1567. doi:10.1093/bioinformatics/btt171

Related Publications

Jia Meng, Xiaodong Cui, Hui Liu, Lin Zhang, Shaowu Zhang, Manjeet Rao, Yidong Chen, and Yufei Huang, "Unveiling the dynamics in RNA epigenetic regulations", 2013 IEEE International Conference on Bioinformatics and Biomedicine (IEEE BIBM 2013), Shanghai, China, December 18-21, 2013
Xiaodong Cui, Jia Meng, Manjeet K. Rao, Yidong Chen, Yufei Huang, “HEP: An HMM-based Exome Peak-finding Package for RNA Epigenome Sequencing Data”, 2013 IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS 2013), Houston, November 17-19, 2013
Meng, J., Cui, X., Rao, M.K., Chen, Y., and Huang, Y. (2013). Exome-based analysis for RNA epigenome sequencing data. Bioinformatics 29, 1565-1567.

Peaks on intron

Nitesh Kumar Singh