this tool never run to its end

[shic...@gmail.com]

Dr Xu Guorong:

it seems that the tool will never run to its end, but when i look at the log file, i saw the error.

11:35:31  <INFO>  Executing command: perl /opt/tomcat7/bin/properties/Xremoveduplicatesfromfastqparts.pl 10000000 50 /opt/tomcat7/bin/uploaded/guaipipi123/qf_1_uniq/qf_1_uniq.fq /opt/tomcat7/bin/uploaded/guaipipi123/2017-02-15.log 

11:35:31  <INFO>  Exited with error code 2

<Console>  11:35:31  <ERROR>  The command can not be successfully executed.

in fact, there is no file in that directory named Xremoveduplicatesfromfastqparts.pl . For the lack of this file, this tool rna compass cannot be used.

it's the problem with my computer or it is the matter of the program itself. 

Thank you !

[GR Xu]

Hi,

Thank you for interesting in RNA CoMPASS!

Please see the attached file.

Best,

Guorong

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