FBD changes with updates?

Caroline Siegert

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Jul 15, 2024, 3:01:15 PM7/15/24

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Hello everyone,

I have an older version of revbayes and my intern has the 1.2.4 version. This line no longer works in the new version, but is still working on mine:

fbd_tree ~ dnConstrainedTopology(fbd_dist, constraints=constraints)

we are getting an error of "invalid calculations" on the new version, has anyone encountered this and know how to fix this?

Benjamin Redelings

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Jul 15, 2024, 5:47:31 PM7/15/24

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Can you be more precise about the error message?

Is it "FBD range process currently disabled due to invalid calculations."?

Caroline Siegert

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Jul 15, 2024, 9:51:51 PM7/15/24

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yes!

Benjamin Redelings

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Jul 15, 2024, 9:53:37 PM7/15/24

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OK, in that case, I believe that Joelle found an problem with the implementation of the fbd range process -- not the other other versions of fbd -- and disabled it so that people wouldn't use it and get incorrect results.

-BenRI

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Benjamin Redelings

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Jul 15, 2024, 9:54:56 PM7/15/24

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Oh, and I should say that from what I heard, the earlier version of revbayes probably also has a bug too, even if it allows the FBD-Range process to run.

-BenRI

On 7/15/24 9:51 PM, Caroline Siegert wrote:

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