error with test data

[Kritika Garg]

Hi All,

I am planning to use Redundans for my genome assembly. However, I get the following error (see below). I get the same error even for test data. I am not sure if there is any issues with the installation.

Options: Namespace(fasta='test/contigs.fa', fastq=['test/5000_1.fq.gz', 'test/5000_2.fq.gz', 'test/600_1.fq.gz', 'test/600_2.fq.gz', 'test/pacbio.fq.gz'], identity=0.51, iters=2, joins=5, limit=0.2, linkratio=0.7, log=<open file '<stderr>', mode 'w' at 0x7f9e3a31b1e0>, longreads=[], mapq=10, mem=16, minLength=200, nocleaning=True, nogapclosing=True, norearrangements=False, noreduction=True, noscaffolding=True, outdir='test/run1', overlap=0.8, reference='', resume=False, threads=4, tmp='/tmp', usebwa=False, verbose=True)
Traceback (most recent call last):
  File "./redundans.py", line 541, in <module>
    main()
  File "./redundans.py", line 529, in main
    _check_dependencies(dependencies)
  File "./redundans.py", line 445, in _check_dependencies
    curver = out.split()[-1]
IndexError: list index out of range

Thank you

Best regards,

Kritika