encoding type ERROR

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Laurent Winckers

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Mar 14, 2019, 5:53:09 AM3/14/19
to RCytoscape

Dear all,


I get error with the createNetworkFromDataFrames function.


Error in curl::curl_fetch_memory(url, handle = handle) : 
  Unrecognized content encoding type. libcurl understands deflate, gzip content encodings.​

When I try to use my own node en edge data frames (attached) to create a network I get this error. While using the example provided with the function description I don't. 
I, and some others have checked that everything, like everything is a character etc., is similar between the example dataframes and my own dataframes. But still this error pops up.

I use cytoscape 3.7.0 and work in RStudio Version 1.1.463. 

The code I have used:

> library(RCy3)
>
cytoscapePing()
> cytoscapeVersionInfo()
>
nodes <- read.table(file.path(getwd(), "Network", "nodes.txt"), header = T, sep = "\t")
> edges <- read.table(file.path(getwd(), "Network", "edges.txt"), header = T, sep = "\t")

> edges$target <- as.character(edges$target)

> createNetworkFromDataFrames(nodes, edges, title = "MyNetwork", collection = "MyCollection")

Hopefully someone can help me!

Best,

Laurent
edges.txt
nodes.txt
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