raxml-ng terminated with error "ERROR: SPR round (LIBPLL-2240)"

[Miao Sun]

Hi,

I am running raxml-ng with cmd "raxml-ng-mpi --all --msa xxxx.raxml.rba --tip-inner --blopt  nr_safe --prefix xxxx -seed 21908 --tree rand{25},pars{25} --bs-metric fbp,tbe"

I used raxml-ng/0.9.0 version and my running enviroment is:

intel/2019.1.144 

openmpi/4.0.0 

raxml-ng/0.9.0

Everything looks normal, until:

[00:05:55] Bootstrap tree #313, logLikelihood: -1212.710573

[00:05:56] Bootstrap tree #314, logLikelihood: -1281.452687

[00:05:57] Bootstrap tree #315, logLikelihood: -1223.572842

[00:06:03] Bootstrap tree #316, logLikelihood: -1197.238943

ERROR: ERROR in SPR round (LIBPLL-2240): BL opt converged to a worse likelihood score by -2.111073709530046 units

--------------------------------------------------------------------------

MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD

with errorcode -1.

NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.

You may or may not see output from other processes, depending on

exactly when Open MPI kills them.

I have read some old posts from this group, I have used options " --blopt nr_safe" and  " --blopt nr_oldsafe", respectively, but still give me error.

Any ideas on this issue?

Thanks!

Miao Sun

[Alexey Kozlov]

Hi Miao Sun,

sorry for delayed response, just came back from vacations.

Could you please send me your input and output files, such that I can reproduce the problem?

Best,
Alexey

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