raxml ML+rapid bootstrap tree output differences
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Ketaki Hardikar
Aug 15, 2022, 8:03:47 AM8/15/22
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What are the key differences between best tree and bipartitions tree? Which one should be used for mitogenome analysis?
Alexandros Stamatakis
Aug 16, 2022, 12:02:23 AM8/16/22
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best tree: best found ML tree
bipartitions tree: best found ML tree with bootstrap supports
On 15.08.22 15:03, Ketaki Hardikar wrote:
> What are the key differences between best tree and bipartitions tree?
> Which one should be used for mitogenome analysis?
>
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Alexandros (Alexis) Stamatakis
Research Group Leader, Heidelberg Institute for Theoretical Studies
Full Professor, Dept. of Informatics, Karlsruhe Institute of Technology
Affiliated Scientist, Evolutionary Genetics and Paleogenomics (EGP) lab,
Institute of Molecular Biology and Biotechnology, Foundation for
Research and Technology Hellas
www.exelixis-lab.org
bipartitions tree: best found ML tree with bootstrap supports
On 15.08.22 15:03, Ketaki Hardikar wrote:
> What are the key differences between best tree and bipartitions tree?
> Which one should be used for mitogenome analysis?
>
> You received this message because you are subscribed to the Google
> Groups "raxml" group.
> To unsubscribe from this group and stop receiving emails from it, send
> an email to raxml+un...@googlegroups.com
> <mailto:raxml+un...@googlegroups.com>.
> To view this discussion on the web visit
> https://groups.google.com/d/msgid/raxml/3ae0dd9d-3f04-4d47-af9b-2ebedb72fa92n%40googlegroups.com
> <https://groups.google.com/d/msgid/raxml/3ae0dd9d-3f04-4d47-af9b-2ebedb72fa92n%40googlegroups.com?utm_medium=email&utm_source=footer>.
--
Alexandros (Alexis) Stamatakis
Research Group Leader, Heidelberg Institute for Theoretical Studies
Full Professor, Dept. of Informatics, Karlsruhe Institute of Technology
Affiliated Scientist, Evolutionary Genetics and Paleogenomics (EGP) lab,
Institute of Molecular Biology and Biotechnology, Foundation for
Research and Technology Hellas
www.exelixis-lab.org
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