Hi,
something weird happened.
I was running a fast bootstrap and accidently moving files
of that run around.
Now I have two RAxML_info files.
The first one (I guess from before moving)
states that the bootstrapping finished:
------------------------------
[...]
Overall Time for 1000 Rapid Bootstraps 71214.883889 seconds
Average Time per Rapid Bootstrap 71.214884 seconds
Starting ML Search ...
------------------------------
The RAxML_bootstrap file there contains 1000 trees.
So this seems to be fine.
The second RAxML_info file lies with a RAxML_bestTree in
a sub-directory.
It basically continues where the first info file ends.
It states that ML search is finished:
------------------------------
Fast ML optimization finished
[...]
ML search took 83540.821969 secs or 23.205784 hours
Combined Bootstrap and ML search took 154755.705982 secs or 42.987696 hours
Drawing Bootstrap Support Values on best-scoring ML tree ...
Found 1 tree in File /path/RAxML_bestTree.foobar
------------------------------
And here occured the error.
So. I have the bootstrap file and the bestTree file.
Can I go on with these files to create the rest of the files?:
bipartitionsBranchLabels and bipartitions
I really would not like to run everything again...
Thanks so much!