The RAxML Grove: An Empirical Phylogenetic Tree Database
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Alexandros Stamatakis
Oct 7, 2021, 1:43:46 AM10/7/21
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Dear Users of RAxML,
As this might be of interest to you I am posting this here as well:
The RAxML Grove, a database containing 60,000 anonymized empirical ML
tree topologies, their estimated model parameters, the patterns of
missing data, and their MSA and partition dimensions obtained from the
RAxML web-servers is now available for general data exploration and
building realistic simulated data experiments:
https://biorxiv.org/cgi/content/short/2021.10.05.463179v1
Alexis
--
Alexandros (Alexis) Stamatakis
Research Group Leader, Heidelberg Institute for Theoretical Studies
Full Professor, Dept. of Informatics, Karlsruhe Institute of Technology
Affiliated Scientist, Evolutionary Genetics and Paleogenomics (EGP) lab,
Institute of Molecular Biology and Biotechnology, Foundation for
Research and Technology Hellas
www.exelixis-lab.org
As this might be of interest to you I am posting this here as well:
The RAxML Grove, a database containing 60,000 anonymized empirical ML
tree topologies, their estimated model parameters, the patterns of
missing data, and their MSA and partition dimensions obtained from the
RAxML web-servers is now available for general data exploration and
building realistic simulated data experiments:
https://biorxiv.org/cgi/content/short/2021.10.05.463179v1
Alexis
--
Alexandros (Alexis) Stamatakis
Research Group Leader, Heidelberg Institute for Theoretical Studies
Full Professor, Dept. of Informatics, Karlsruhe Institute of Technology
Affiliated Scientist, Evolutionary Genetics and Paleogenomics (EGP) lab,
Institute of Molecular Biology and Biotechnology, Foundation for
Research and Technology Hellas
www.exelixis-lab.org
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