Re: [r-inla] Trouble installing INLA

[Helpdesk]

since there is a 'source' package that is newer (and we now build for R-
4.2) you need to add argument

type="binary"

to install.packages(), to get the binary package for R-4.1



install.packages("INLA",repos=c(getOption("repos"),INLA="https://inla.r-inla-download.org/R/testing
"), type="binary", dep=TRUE)


since we're at R-4.2, it might be a good idea to upgrade.



-----Original Message-----
From: Tricia Thibodeau <thib...@uri.edu>
To: R-inla discussion group <r-inla-disc...@googlegroups.com>
Subject: [r-inla] Trouble installing INLA
Date: Mon, 9 May 2022 11:20:38 -0700 (PDT)

Hi all,
I am a new INLA user and am having trouble installing the package. I am
on a Windows 11 with RStudio version 4.1.2. When I use the download
command as suggested on your website, I receive this error message:

>
install.packages("INLA",repos=c(getOption("repos"),INLA="https://inla.r-inla-download.org/R/stable
"), dep=TRUE)
WARNING: Rtools is required to build R packages but is not currently
installed. Please download and install the appropriate version of Rtools
before proceeding:

https://cran.rstudio.com/bin/windows/Rtools/
Installing package into ‘C:/Users/pthib/OneDrive/Documents/R/win-
library/4.1’
(as ‘lib’ is unspecified)
Warning in install.packages :
  dependencies ‘Rgraphviz’, ‘graph’ are not available

  There is a binary version available but the source version is later:
       binary   source needs_compilation
INLA 22.05.03 22.05.07             FALSE

installing the source package ‘INLA’

trying URL
'https://inla.r-inla-download.org/R/stable/src/contrib/INLA_22.05.07.tar.gz
'
Warning in install.packages :
  InternetOpenUrl failed: 'The operation timed out'
Error in download.file(url, destfile, method, mode = "wb", ...) :
  cannot open URL
'https://inla.r-inla-download.org/R/stable/src/contrib/INLA_22.05.07.tar.gz
'
Warning in install.packages :
  download of package ‘INLA’ failed

I also tried downloading and installing the different packages (INLA
22.05.03 & 22.05.07) separately on my computer but I was still receiving
an error that the package is not available for my version of R. Do you
have any suggestions?

Thanks,
Tricia
--
—————————————
Patricia 'Tricia' Thibodeau, Ph.D.
Postdoctoral Research Fellow
University of Rhode Island | Graduate School of Oceanography
thib...@uri.edu
President, Society for Women in Marine Science
pronouns: she/her/hers
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--
Håvard Rue
he...@r-inla.org

[Helpdesk]

this 'trick' works for Mac and Win, but for linux one might have to
download manually version 22.05.03 (which is the latest one built with
R-4.1). Its a good idea to upgrade R though.