R-INLA Installing in Rstudio

[Ali Mansour]

Hello

I faced the following problem in installing R-INLA in Rstudio

> install.packages("INLA", repos="https://www.math.ntnu.no/inla/R/stable")

Installing package into ‘C:/Users/Ali/Documents/R/win-library/3.1’

(as ‘lib’ is unspecified)

trying URL 'https://www.math.ntnu.no/inla/R/stable/bin/windows/contrib/3.1/INLA_0.0-1462127027.zip'

Content type 'application/zip' length 72912500 bytes (69.5 Mb)

opened URL

downloaded 69.5 Mb

Warning in install.packages :

  unable to move temporary installation ‘C:\Users\Ali\Documents\R\win-library\3.1\file1110aa8f0a\INLA’ to ‘C:\Users\Ali\Documents\R\win-library\3.1\INLA’

The downloaded binary packages are in

C:\Users\Ali\AppData\Local\Temp\RtmpKaDLSL\downloaded_packages

> library(INLA)

Error in library(INLA) : there is no package called ‘INLA’

> require(INLA)

Loading required package: INLA

Warning message:

In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,  :

  there is no package called ‘INLA’

Please I need your help to fix this problem !

[Daniel Simpson]

Hi,

I've seen this before - it seems to be a weird r-studio on windows quirk.  For some reason it is trying to put the files into a directory that doesn't exist. 

If you can find where your R-packages are stored (ie the installation directory for R), then you can manually copy the folder from

C:\Users\Ali\AppData\Local\Temp\RtmpKaDLSL\downloaded_packages

To the relevant location. 

Hope this helps,

Dan

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[Ali Mansour]

I tried even though to change the default R package as shown in the above photo and I got the same error :(

[Ali Mansour]

I did with your advice Mr. Simpson, thank you very much for that hint :) ,  In addition I want to menshioned that I got the following lines in RStudio as I wanted to check the package INLA after I moved the INLA file to the library file in R:

> library(INLA)

Loading required package: sp

Loading required package: Matrix

Loading required package: splines

Error in library(INLA) : 

  package ‘INLA’ does not have a namespace and should be re-installed

In addition: Warning messages:

1: package ‘INLA’ was built under R version 3.2.3 

2: package ‘sp’ was built under R version 3.1.3 

> ? INLA

No documentation for ‘INLA’ in specified packages and libraries:

you could try ‘??INLA’

> ?INLA

No documentation for ‘INLA’ in specified packages and libraries:

you could try ‘??INLA’

> help(INLA)

No documentation for ‘INLA’ in specified packages and libraries:

you could try ‘??INLA’

> require(INLA)

Loading required package: INLA

Failed with error:  ‘package ‘INLA’ does not have a namespace and should be re-installed’

In addition: Warning message:

package ‘INLA’ was built under R version 3.2.3 

R-INLA is working hopfully fine then with "R version 3.2.3" as I checked and shown below:

> library(INLA)

Loading required package: sp

Loading required package: Matrix

Loading required package: splines

This is INLA 0.0-1462127027, dated 2016-05-01 (14:00:55+0200).

See www.r-inla.org/contact-us for how to get help.

Warning message:

package ‘sp’ was built under R version 3.2.5 

> 

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On Saturday, May 7, 2016 at 12:19:15 PM UTC+2, Ali Mansour wrote: