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R-inla discussion group
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Welcome to this discussion group about r-inla. Please ask your questions here in case you think they will be useful for others, otherwise send them to
help@r-inla.org
. You are of'course free to comment on questions from others as well.
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Seth Flaxman
, …
Finn Lindgren
4
Oct 3
inlabru: "You might want to consider to setting ``control.predictor=list(link=...)''"
Control.predictor has to be given as options=list(control.predictor=…) in bru() calls. But the needed
unread,
inlabru: "You might want to consider to setting ``control.predictor=list(link=...)''"
Control.predictor has to be given as options=list(control.predictor=…) in bru() calls. But the needed
Oct 3
shicx
,
Helpdesk (Haavard Rue)
3
Oct 3
A question about the INLA crashed
Thanks for your reply, can I send you my data and code via email? thanks again! 在2023年9月27日星期三 UTC+8
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A question about the INLA crashed
Thanks for your reply, can I send you my data and code via email? thanks again! 在2023年9月27日星期三 UTC+8
Oct 3
suzy
,
Virgilio Gómez-Rubio
2
Oct 3
SEM model
Hi, Is there an explanation for the slm effect of the model in this picture? For example, do darker
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SEM model
Hi, Is there an explanation for the slm effect of the model in this picture? For example, do darker
Oct 3
newer
,
Helpdesk (Haavard Rue)
3
Oct 3
problem of SPDE and NS combined model prediction
thanks for your kind answer. I used the “rw1” model before, but i do not know how to explain the
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problem of SPDE and NS combined model prediction
thanks for your kind answer. I used the “rw1” model before, but i do not know how to explain the
Oct 3
Yessika Adelwin Natalia
Oct 2
Joint model: compund symmtery and correlated random effects
Dear INLA community I want to fit a joint Binomial-Poisson areal model with this definition : r_ij ~
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Joint model: compund symmtery and correlated random effects
Dear INLA community I want to fit a joint Binomial-Poisson areal model with this definition : r_ij ~
Oct 2
Yibeltal Aytenew
Oct 2
To R=inla disscussion
when i use this code the error will be get but in this code for exponential,weibull,loglormaland
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To R=inla disscussion
when i use this code the error will be get but in this code for exponential,weibull,loglormaland
Oct 2
Yibeltal Aytenew
Oct 2
from yibeltal
loglogistic.model <- inla(formula, data = mydata, family = "loglogistic.surv", control.
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from yibeltal
loglogistic.model <- inla(formula, data = mydata, family = "loglogistic.surv", control.
Oct 2
TheCorinna1994
,
Finn Lindgren
5
Oct 2
bgev prediction
Thank you very much Finn! On Tuesday, 26 September 2023 at 15:41:52 UTC+2 Finn Lindgren wrote: Hi, I
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bgev prediction
Thank you very much Finn! On Tuesday, 26 September 2023 at 15:41:52 UTC+2 Finn Lindgren wrote: Hi, I
Oct 2
Getachew Dejene
,
Helpdesk (Haavard Rue)
2
Sep 29
Expected values
The expected counts in area i are calculated as Expected_i = Population_i * SumCasesAllAreas/
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Expected values
The expected counts in area i are calculated as Expected_i = Population_i * SumCasesAllAreas/
Sep 29
Yessika Adelwin Natalia
,
Denis Rustand
5
Sep 29
Joint model: shared fixed effect with categorical covariate
Hi Denis Thank you very much for your explanation and the code. It works like a charm. :) Kind
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Joint model: shared fixed effect with categorical covariate
Hi Denis Thank you very much for your explanation and the code. It works like a charm. :) Kind
Sep 29
Sébastien Coube
,
Finn Lindgren
3
Sep 28
Is it possible to get an anisotropic Matérn model with INLA ?
Hello Finn, Thank you for your answer ! As for anisotropy parametrization, I am a big fan of matrix
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Is it possible to get an anisotropic Matérn model with INLA ?
Hello Finn, Thank you for your answer ! As for anisotropy parametrization, I am a big fan of matrix
Sep 28
JUAN MIGUEL REQUENA MULLOR
,
Finn Lindgren
2
Sep 28
dirinla + spde
Hi, No the dirinla package don't support spatial models; it only supports fixed effects and plain
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dirinla + spde
Hi, No the dirinla package don't support spatial models; it only supports fixed effects and plain
Sep 28
Sébastien Coube
Sep 28
How does the number of high-level parameters impact the cost of INLA ?
This question is completely unrelated with the one I just posted, but it is an interrogation I've
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How does the number of high-level parameters impact the cost of INLA ?
This question is completely unrelated with the one I just posted, but it is an interrogation I've
Sep 28
T
,
Havard Rue
2
Sep 28
Installation of INLA in the server
Usually this is a normal using R 4.3 After install you might need to install other binaries with inla
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Installation of INLA in the server
Usually this is a normal using R 4.3 After install you might need to install other binaries with inla
Sep 28
Louis Georgi
,
Finn Lindgren
12
Sep 27
inla.stack Error: Mismatching row sizes
Hallo Finn, Yes! Thank you! mesh$n <- nrow(mesh$loc) solved the problem! "original"
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inla.stack Error: Mismatching row sizes
Hallo Finn, Yes! Thank you! mesh$n <- nrow(mesh$loc) solved the problem! "original"
Sep 27
Emma Skarstein
, …
Denis Rustand
7
Sep 27
INLA survival model formulation using inla.stack and multiple likelihoods
Thank you all for these comments! I'm looking forward to seeing the future INLA interface. I did
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INLA survival model formulation using inla.stack and multiple likelihoods
Thank you all for these comments! I'm looking forward to seeing the future INLA interface. I did
Sep 27
Fabio Zottele
, …
Helpdesk (Haavard Rue)
3
Sep 27
Spatotemporal dataset creation
using the randomfields package is ok for simulating data. the books at r-inla.org (available on www)
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Spatotemporal dataset creation
using the randomfields package is ok for simulating data. the books at r-inla.org (available on www)
Sep 27
Charlotte Taelman
, …
Helpdesk (Haavard Rue)
12
Sep 27
cenpoisson requirements
oops, the 'cenpoisson' is cencored in the way that observations in the interval [L,H] is
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cenpoisson requirements
oops, the 'cenpoisson' is cencored in the way that observations in the interval [L,H] is
Sep 27
INLA help
, …
Tim Meehan
4
Sep 26
Re: [r-inla] Complex models work - simple models crash
Thanks, Finn! On Tuesday, September 26, 2023 at 11:45:01 AM UTC-6 Finn Lindgren wrote: For the bru
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Re: [r-inla] Complex models work - simple models crash
Thanks, Finn! On Tuesday, September 26, 2023 at 11:45:01 AM UTC-6 Finn Lindgren wrote: For the bru
Sep 26
Sean Anderson
,
Finn Lindgren
4
Sep 26
fm_rcdt_2d_inla vs. inla.mesh.create differences
I'm not sure why default “n” seems to have changed; I'll look into it. Finn On 26 Sep 2023,
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fm_rcdt_2d_inla vs. inla.mesh.create differences
I'm not sure why default “n” seems to have changed; I'll look into it. Finn On 26 Sep 2023,
Sep 26
suzy
,
Havard Rue
2
Sep 23
f(id, initial = -10, fixed = T)
This is a iid model with fixed precision =exp(-10). Essentially a uniform distribution indexed by
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f(id, initial = -10, fixed = T)
This is a iid model with fixed precision =exp(-10). Essentially a uniform distribution indexed by
Sep 23
Erin B
,
Finn Lindgren
17
Sep 22
LGCP in INLA vs inlabru
crs info is consistent across the board.. I have tried multiple combinations of priors for pcmatern
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LGCP in INLA vs inlabru
crs info is consistent across the board.. I have tried multiple combinations of priors for pcmatern
Sep 22
Eke Arua
,
Helpdesk (Haavard Rue)
4
Sep 20
vb.correction issues
Thank you so much for your prompt response. The model works for the first time with no warning or
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vb.correction issues
Thank you so much for your prompt response. The model works for the first time with no warning or
Sep 20
Annabel Webb
,
Janet Van Niekerk
2
Sep 20
Joint models in INLA using "current value" parameterisation
Hi Annabel, There is now a new package INLAjoint that is specifically for fitting joint models
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Joint models in INLA using "current value" parameterisation
Hi Annabel, There is now a new package INLAjoint that is specifically for fitting joint models
Sep 20
Peter Mair
,
Finn Lindgren
2
Sep 18
Prediction at validation stations
Hi Peter, your model formula has two conflicting latent component definitions. If you wanted a model
unread,
Prediction at validation stations
Hi Peter, your model formula has two conflicting latent component definitions. If you wanted a model
Sep 18
Oscar Key
, …
Helpdesk (Haavard Rue)
8
Sep 16
guidance for the generic model
these implementations are mainly to access the same internals as the inla-program, hence there is
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guidance for the generic model
these implementations are mainly to access the same internals as the inla-program, hence there is
Sep 16
paradin...@gmail.com
,
Håvard Rue
3
Sep 16
qqplot for tweedie model
Thank you Havard for the response. Yes, I found my way in the simple “just-intercept” sort of
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qqplot for tweedie model
Thank you Havard for the response. Yes, I found my way in the simple “just-intercept” sort of
Sep 16
Peter Mair
,
Håvard Rue
3
Sep 15
Define own "family" and multivariate marginal distributions
Multivariate likelihoods could be possible and some are, like inla.doc("gaussianjw") and of
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Define own "family" and multivariate marginal distributions
Multivariate likelihoods could be possible and some are, like inla.doc("gaussianjw") and of
Sep 15
just one
,
Helpdesk (Haavard Rue)
2
Sep 15
INLA.Data1
Binomial data assumes integer response, but yours are not, like 17.01 as reported in the error msg On
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INLA.Data1
Binomial data assumes integer response, but yours are not, like 17.01 as reported in the error msg On
Sep 15
Greta Panunzi
,
Finn Lindgren
7
Sep 14
Issues with eval_spatial
Thank you very much. There might be some issues with the data I'm using in the model. I'll
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Issues with eval_spatial
Thank you very much. There might be some issues with the data I'm using in the model. I'll
Sep 14