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Welcome to this discussion group about r-inla. Please ask your questions here in case you think they will be useful for others, otherwise send them to
help@r-inla.org
. You are of'course free to comment on questions from others as well.
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Ebenezer Ogunsakin
,
Kai
3
2:11 PM
Bayesian spatiotemporal model
Thanks for your response, Kai. I have used verbose=TRUE, before sending this comment. It wasn't
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Bayesian spatiotemporal model
Thanks for your response, Kai. I have used verbose=TRUE, before sending this comment. It wasn't
2:11 PM
sekar dewi
, …
Aditya L. Ramadona
5
1:04 PM
Unsual Mean Fitted Values
Thank you. I've changed it into bym2 model and it works. Actually, I also tried to run some other
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Unsual Mean Fitted Values
Thank you. I've changed it into bym2 model and it works. Actually, I also tried to run some other
1:04 PM
Ebenezer Ogunsakin
12:23 PM
INLA PROBLEM
Good day. Please can anyone help with how to handle this error *** inla.core.safe: The inla program
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INLA PROBLEM
Good day. Please can anyone help with how to handle this error *** inla.core.safe: The inla program
12:23 PM
Helpdesk
, …
Roel van Klink
17
7:28 AM
Re: [r-inla] GMRFLib_2order_approx: rescue NAN/INF values in logl for idx
The singularity is introduced in the model spesification... so it is something you spesify that I
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Re: [r-inla] GMRFLib_2order_approx: rescue NAN/INF values in logl for idx
The singularity is introduced in the model spesification... so it is something you spesify that I
7:28 AM
Tatiana Pineda Portella
, …
Moussa Tao
4
2:20 AM
Discrepancy in Spatiotemporal Model Outcome
Hello, how to verify the efficience of model us INLA ans SPDE? Le ven. 19 juil. 2024 à 20:35,
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Discrepancy in Spatiotemporal Model Outcome
Hello, how to verify the efficience of model us INLA ans SPDE? Le ven. 19 juil. 2024 à 20:35,
2:20 AM
Virgilio Gómez Rubio
, …
Finn Lindgren
10
1:47 AM
Copy feature in inlabru
Hi, Yes, the problem is that method 1 evaluates the raster multiple times, but method 2 only when
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Copy feature in inlabru
Hi, Yes, the problem is that method 1 evaluates the raster multiple times, but method 2 only when
1:47 AM
Kai
,
Helpdesk (Haavard Rue)
2
Jul 20
Optimizing underestimated prediction with missing covariates in recent years
On Thu, 2024-07-18 at 02:52 -0700, Kai wrote: > Dear R-INLA community > I am doing spatial-
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Optimizing underestimated prediction with missing covariates in recent years
On Thu, 2024-07-18 at 02:52 -0700, Kai wrote: > Dear R-INLA community > I am doing spatial-
Jul 20
Alexander Jack
,
Helpdesk (Haavard Rue)
4
Jul 20
Interpretation of BLUPs
In the same regression as this random ar process On Sat, Jul 20, 2024, 11:15 Alexander Jack <
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Interpretation of BLUPs
In the same regression as this random ar process On Sat, Jul 20, 2024, 11:15 Alexander Jack <
Jul 20
Ruby Ji
Jul 20
Barrier Q
Dear all, I am trying to better understand how the precision matrix Q is calculated in the barrier
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Barrier Q
Dear all, I am trying to better understand how the precision matrix Q is calculated in the barrier
Jul 20
Gabrielle Koerich
, …
Finn Lindgren
17
Jul 19
Varying slopes LGCP model?
Oh I see! This works, thank you very much. I'll try to understand better what this is doing but
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Varying slopes LGCP model?
Oh I see! This works, thank you very much. I'll try to understand better what this is doing but
Jul 19
Marc
, …
Helpdesk (Haavard Rue)
7
Jul 19
Introducing a Constraint in the Leroux (besagproper2) Random Effects Model
Thank you very much, Haavard! We will test the code and let you know if it worked for us. Best
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Introducing a Constraint in the Leroux (besagproper2) Random Effects Model
Thank you very much, Haavard! We will test the code and let you know if it worked for us. Best
Jul 19
Aria
, …
Denis Rustand
4
Jul 18
fitted value for zeroinflatedpoisson0 family
Hi Aria, You can just skip the estimation of p as it seems useless in your case, it looks like you
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fitted value for zeroinflatedpoisson0 family
Hi Aria, You can just skip the estimation of p as it seems useless in your case, it looks like you
Jul 18
Nicholas Arisco
,
Helpdesk (Haavard Rue)
4
Jul 17
Issue specifying link for prediction -- nbinomial distributional assumption
Thank you, Havard, this is very helpful. You have successfully fixed my issue! On Wed, Jul 17, 2024
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Issue specifying link for prediction -- nbinomial distributional assumption
Thank you, Havard, this is very helpful. You have successfully fixed my issue! On Wed, Jul 17, 2024
Jul 17
Alexander Jack
,
Helpdesk (Haavard Rue)
4
Jul 17
Computing Marginal Probability of Fixed Effect Over Time
the concept will work for essentially anything. if you have a covariate x and want to check its
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Computing Marginal Probability of Fixed Effect Over Time
the concept will work for essentially anything. if you have a covariate x and want to check its
Jul 17
Zirou Zhou
,
Helpdesk (Haavard Rue)
2
Jul 17
Simulation from the iid4d hyperparameters
A better implementation is 'iidkd', where you set k=4. see inla.doc("iidkd") and
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Simulation from the iid4d hyperparameters
A better implementation is 'iidkd', where you set k=4. see inla.doc("iidkd") and
Jul 17
TheCorinna1994
,
Finn Lindgren
3
Jul 16
combined analysis of point-level and area-level data
Dear Finn, thanks for the answer. I will have a look at the paper! Have a nice holiday, Corinna On
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combined analysis of point-level and area-level data
Dear Finn, thanks for the answer. I will have a look at the paper! Have a nice holiday, Corinna On
Jul 16
Jan jaap poos
Jul 16
Making spatial
Dear all, I have a space-time model in INLA that is defined as a SPDE model for the spatial domain
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Making spatial
Dear all, I have a space-time model in INLA that is defined as a SPDE model for the spatial domain
Jul 16
Aria
, …
Janet Van Niekerk
4
Jul 15
Error: For survival models, then the reponse has to be of class `inla.surv'; you have `list'
Hi Finn, thank you for your reply. On Friday, July 12, 2024 at 5:10:15 PM UTC-4 Finn Lindgren wrote:
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Error: For survival models, then the reponse has to be of class `inla.surv'; you have `list'
Hi Finn, thank you for your reply. On Friday, July 12, 2024 at 5:10:15 PM UTC-4 Finn Lindgren wrote:
Jul 15
mahsa nadifar
,
Helpdesk (Haavard Rue)
6
Jul 14
Issues with Precision Parameters Using INLA for Bivariate Spatial Poisson Regression with Shared Component
I take this thread off the list as its getting to spesific On Sun, 2024-07-14 at 00:50 -0700, mahsa
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Issues with Precision Parameters Using INLA for Bivariate Spatial Poisson Regression with Shared Component
I take this thread off the list as its getting to spesific On Sun, 2024-07-14 at 00:50 -0700, mahsa
Jul 14
Ismael Ahmad Rab
,
Håvard Rue
2
Jul 13
Marginal log-Likelihood
the log-likelihood is compute as the log of the normalization constant as described in the INLA 2009
unread,
Marginal log-Likelihood
the log-likelihood is compute as the log of the normalization constant as described in the INLA 2009
Jul 13
Aria
,
Helpdesk (Haavard Rue)
3
Jul 11
Error when adding splines to different models
Thank you very much for your help! On Thursday, July 11, 2024 at 5:57:41 AM UTC-4 Helpdesk (Haavard
unread,
Error when adding splines to different models
Thank you very much for your help! On Thursday, July 11, 2024 at 5:57:41 AM UTC-4 Helpdesk (Haavard
Jul 11
Nilu
,
INLA help
2
Jul 11
Using INLA in secure systems
And the secure system runs what OS system? — Haavard Rue Helpdesk he...@r-inla.org On 11 Jul 2024 at
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Using INLA in secure systems
And the secure system runs what OS system? — Haavard Rue Helpdesk he...@r-inla.org On 11 Jul 2024 at
Jul 11
Abi Riley
,
Helpdesk (Haavard Rue)
2
Jul 11
PARDISO for INLA on HPC
If you run on a cluster, with a login-node, but then the job can be run on another node, the current
unread,
PARDISO for INLA on HPC
If you run on a cluster, with a login-node, but then the job can be run on another node, the current
Jul 11
mike.bl...@gmail.com
, …
Abi Riley
10
Jul 10
SPDE overfitting?
Dear Thierry I know this post has been dormant for awhile, but I'm having a similar issue. I'
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SPDE overfitting?
Dear Thierry I know this post has been dormant for awhile, but I'm having a similar issue. I'
Jul 10
Martin Lotto Batista
, …
Håvard Rue
4
Jul 7
Never ending convergence issue
I guess you install the proper binary for the HPC, using inla.binary.install() ? you can try adding
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Never ending convergence issue
I guess you install the proper binary for the HPC, using inla.binary.install() ? you can try adding
Jul 7
shuqi wu
Jul 5
INLA Error: spde.prefix=NULL Required for SPDE Model
Hello, I am working on a spatial analysis using the INLA package in R and have encountered a
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INLA Error: spde.prefix=NULL Required for SPDE Model
Hello, I am working on a spatial analysis using the INLA package in R and have encountered a
Jul 5
Brian
Jul 4
Interaction Effects
Hi, Suppose that I have an INLA model with main and interaction effects x1, x2, x1:x2, where the
unread,
Interaction Effects
Hi, Suppose that I have an INLA model with main and interaction effects x1, x2, x1:x2, where the
Jul 4
Dominique Soudant
,
Finn Lindgren
6
Jul 4
[DLM with INLA] Interventions
Ok I get it, thank you so much for taking the time to reply. Regards DS Le mercredi 3 juillet 2024 à
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[DLM with INLA] Interventions
Ok I get it, thank you so much for taking the time to reply. Regards DS Le mercredi 3 juillet 2024 à
Jul 4
Brian
, …
Finn Lindgren
8
Jul 2
Sampling the dependent variable
Okay. Thank you. On Tuesday, July 2, 2024 at 8:52:57 PM UTC+3 Finn Lindgren wrote: To get the
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Sampling the dependent variable
Okay. Thank you. On Tuesday, July 2, 2024 at 8:52:57 PM UTC+3 Finn Lindgren wrote: To get the
Jul 2
Brian
,
Finn Lindgren
3
Jul 2
Understanding the summary.linear.predictor
Thanks a lot, now I have understood On Tuesday, July 2, 2024 at 3:31:22 PM UTC+3 Finn Lindgren wrote:
unread,
Understanding the summary.linear.predictor
Thanks a lot, now I have understood On Tuesday, July 2, 2024 at 3:31:22 PM UTC+3 Finn Lindgren wrote:
Jul 2