R-inla discussion group

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Welcome to this discussion group about r-inla. Please ask your questions here in case you think they will be useful for others, otherwise send them to help@r-inla.org. You are of'course free to comment on questions from others as well.

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barmou...@gmail.com, Helpdesk2

Apr 18

Bayesian additive regression trees

That is not supported, sorry. On Sun, 2021-04-18 at 00:52 -0700, barmou...@gmail.com wrote: > Dear

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Bayesian additive regression trees

That is not supported, sorry. On Sun, 2021-04-18 at 00:52 -0700, barmou...@gmail.com wrote: > Dear

Apr 18

KB, … Virgilio Gómez-Rubio4

Apr 17

Cannot find R Code for SPDE Book

Thanks so much! On Saturday, April 17, 2021 at 12:27:11 PM UTC-4 becario...@gmail.com wrote: Hi, The

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Cannot find R Code for SPDE Book

Thanks so much! On Saturday, April 17, 2021 at 12:27:11 PM UTC-4 becario...@gmail.com wrote: Hi, The

Apr 17

Kristin Bondo, … Helpdesk7

Apr 17

Can BYM INLA models be used if there are multiple points per grid cell?

Hi Håvard, Thanks so much! That was very helpful. - Kristin On Saturday, March 27, 2021 at 8:58:43 AM

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Can BYM INLA models be used if there are multiple points per grid cell?

Hi Håvard, Thanks so much! That was very helpful. - Kristin On Saturday, March 27, 2021 at 8:58:43 AM

Apr 17

joey ha, Helpdesk3

Apr 16

Multicores on Apple's M1 chip

Hi Prof. Rue, I tried demo(Leuk) and it was utilizing 8-threads. So it is not the problem of M1 chips

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Multicores on Apple's M1 chip

Hi Prof. Rue, I tried demo(Leuk) and it was utilizing 8-threads. So it is not the problem of M1 chips

Apr 16

Luke Miniature Australian Shepherd

Apr 15

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Apr 15

Luke Miniature Australian Shepherd

Apr 15

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Apr 15

exglobal...@gmail.com, Luke Miniature Australian Shepherd2

Apr 15

Buy 100% undetectable counterfeit money. Whatsapp:..(+12182884075) and quality documents.

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Apr 15

yang xu, Helpdesk2

Apr 13

Could we use INLA to fit spatial latent factor model?

in short, no. the reason is that you then have product of normals, like factor times loadings, and

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Could we use INLA to fit spatial latent factor model?

in short, no. the reason is that you then have product of normals, like factor times loadings, and

Apr 13

Mtani Njegere, … Prince Michael Amegbor3

Apr 12

Log-binomial regression

Hi, This is my suggestion (I could be wrong). In normal glm you can specify log-binomial as glm(

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Log-binomial regression

Hi, This is my suggestion (I could be wrong). In normal glm you can specify log-binomial as glm(

Apr 12

joey ha, Helpdesk3

Apr 11

How can we specify the structure of covariance matrix in INLA?

Thanks for your help! On Sunday, April 11, 2021 at 5:34:41 PM UTC-4 he...@r-inla.org wrote: On Sun,

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How can we specify the structure of covariance matrix in INLA?

Thanks for your help! On Sunday, April 11, 2021 at 5:34:41 PM UTC-4 he...@r-inla.org wrote: On Sun,

Apr 11

Richard Bailey, Finn Lindgren4

Apr 8

Nonlinear regression

Hi Finn, Many thanks for responding, I'll try and clarify the question and why I'm asking (I

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Nonlinear regression

Hi Finn, Many thanks for responding, I'll try and clarify the question and why I'm asking (I

Apr 8

FredrikLAa, Helpdesk5

Apr 8

Assertion `arg->Q->a[0] > 0.0' failed.

Thanks for the quick reply. I tried with 0 and also with 0.1 Function call: mod=do.call(inla,args=

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Assertion `arg->Q->a[0] > 0.0' failed.

Thanks for the quick reply. I tried with 0 and also with 0.1 Function call: mod=do.call(inla,args=

Apr 8

mahsa nadifar, Helpdesk6

Apr 6

How to solve this problem: Fail to factorize Q. I will try to fix it

then I need to rerun it here to check On Tue, 2021-04-06 at 11:48 -0700, mahsa nadifar wrote: > No

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How to solve this problem: Fail to factorize Q. I will try to fix it

then I need to rerun it here to check On Tue, 2021-04-06 at 11:48 -0700, mahsa nadifar wrote: > No

Apr 6

Michael Desjardins, Helpdesk3

Apr 6

Spatiotemporal barrier model fails to run

Hi Håvard, Thanks for your prompt response. I will send over the files and see if you can run it.

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Spatiotemporal barrier model fails to run

Hi Håvard, Thanks for your prompt response. I will send over the files and see if you can run it.

Apr 6

Guillermo, INLA help3

Apr 6

summary.hyperpar providing erroneous results

Dear Haavard, Thanks for your reply. I will prepare the files and send them to you privately. In the

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summary.hyperpar providing erroneous results

Dear Haavard, Thanks for your reply. I will prepare the files and send them to you privately. In the

Apr 6

Longwen Zhao, Helpdesk4

Apr 5

About prior distribution

these might be helpful https://arxiv.org/abs/1604.00860 https://arxiv.org/abs/1802.06350 On Mon, 2021

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About prior distribution

these might be helpful https://arxiv.org/abs/1604.00860 https://arxiv.org/abs/1802.06350 On Mon, 2021

Apr 5

wenlo...@gmail.com

Apr 4

R INLA spatial prediction VS universal kriging with geoR

Hi, I did a comparison between R-inla prediction and kriging function in geoR package, found that the

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R INLA spatial prediction VS universal kriging with geoR

Hi, I did a comparison between R-inla prediction and kriging function in geoR package, found that the

Apr 4

Thierry Onkelinx, … Helpdesk4

Apr 2

Dear Håvard and Finn, I ran a little simulation study comparing glm and inla for the gam family. For

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Dear Håvard and Finn, I ran a little simulation study comparing glm and inla for the gam family. For

Apr 2

sbh...@gmail.com, … Helpdesk6

Mar 31

Variance/covariance of predictions in joint gaussian model

Thanks for the advice. I was able to use the observation model to capture the variance/covariance in

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Variance/covariance of predictions in joint gaussian model

Thanks for the advice. I was able to use the observation model to capture the variance/covariance in

Mar 31

Mar 31

How to extract the results of spatial random field?

Hello All, When I analyze the spatial model with spatial random field (MVN(0, R), where R is Matern

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How to extract the results of spatial random field?

Hello All, When I analyze the spatial model with spatial random field (MVN(0, R), where R is Matern

Mar 31

simon brewer, Helpdesk6

Mar 27

Problems running full ST model

Thank you for the quick reply. I'll try your suggestions today, and get back to you. If I'm

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Problems running full ST model

Thank you for the quick reply. I'll try your suggestions today, and get back to you. If I'm

Mar 27

alyssa...@duke.edu, … Helpdesk18

Mar 27

Precision parameters are very high. Is there an explanation?

Hi Seeds has only 21 observations, hence the prior for the precision used would be cruial also, with

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Precision parameters are very high. Is there an explanation?

Hi Seeds has only 21 observations, hence the prior for the precision used would be cruial also, with

Mar 27

FredrikLAa, … Helpdesk8

Mar 27

Memory problem? (Abort on large dataset, but sub-dataset works)

Yes, its likely a RAM issue although 120Gb seems a lot, you have to look at it as RAM pr core, and

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Memory problem? (Abort on large dataset, but sub-dataset works)

Yes, its likely a RAM issue although 120Gb seems a lot, you have to look at it as RAM pr core, and

Mar 27

Vera Tibot, Helpdesk7

Mar 25

Spatially varying coefficient model

you might need a proper prior for the intercept, try with control.fixed=list(prec.intercept=1) to see

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Spatially varying coefficient model

you might need a proper prior for the intercept, try with control.fixed=list(prec.intercept=1) to see

Mar 25

joenomiddl...@gmail.com, Helpdesk3

Mar 24

Requested update to the 'cenpoisson' likelihood

Thanks, Håvard! I agree - it's not a typical problem... :P Best, Joe On Wednesday, 24 March 2021

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Requested update to the 'cenpoisson' likelihood

Thanks, Håvard! I agree - it's not a typical problem... :P Best, Joe On Wednesday, 24 March 2021

Mar 24

James Ramsey, Helpdesk5

Mar 24

"dyld: Library not loaded" error when trying to run INLA

I found that another thing that seemed to work was to go to the directory where the "inla"

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"dyld: Library not loaded" error when trying to run INLA

I found that another thing that seemed to work was to go to the directory where the "inla"

Mar 24

Edgar Josymar Torrejón-Magallanes, Helpdesk2

Mar 23

see www.r-inla.org On Tue, 2021-03-23 at 14:12 -0700, Edgar Josymar Torrejón-Magallanes wrote: >

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see www.r-inla.org On Tue, 2021-03-23 at 14:12 -0700, Edgar Josymar Torrejón-Magallanes wrote: >

Mar 23

Daniel Simpson, … Cici Chen9

Mar 22

inla.qsample failing (it might be R4.0, it might be macOS High Sierra?)

In case this might help with other uses. If you have issues of running INLA on macOS High Sierra, can

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inla.qsample failing (it might be R4.0, it might be macOS High Sierra?)

In case this might help with other uses. If you have issues of running INLA on macOS High Sierra, can

Mar 22

SODE Idelphonse, … Elias T. Krainski13

Mar 19

Fitting Spatial GLMs to proportion data using INLA-SPDE approach -Error in building stack object for prediction

Prof Krainski, Thank you for taking your time to fix the issue and improve my code. It is very

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Fitting Spatial GLMs to proportion data using INLA-SPDE approach -Error in building stack object for prediction

Prof Krainski, Thank you for taking your time to fix the issue and improve my code. It is very

Mar 19

Finn Lindgren, Kuan Liang2

Mar 16

Re: [r-inla] Which way I provided here is suitable (or correct) for spatial simulation of geostatistical applications?

Hi, Finn, thank you for the clarification. Finn Lindgren <finn.lindgren@gmail.com> 于2021年3月16日

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Re: [r-inla] Which way I provided here is suitable (or correct) for spatial simulation of geostatistical applications?

Hi, Finn, thank you for the clarification. Finn Lindgren <finn.lindgren@gmail.com> 于2021年3月16日

Mar 16

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