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Welcome to this discussion group about r-inla. Please ask your questions here in case you think they will be useful for others, otherwise send them to help@r-inla.org. You are of'course free to comment on questions from others as well.

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Felipe Barletta, Finn Lindgren6

1:06 PM

Then it depends on whether your observation model is discrete or continuous. Finn On Fri, 13 Dec 2024

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Then it depends on whether your observation model is discrete or continuous. Finn On Fri, 13 Dec 2024

1:06 PM

Alokesh Manna, … Finn Lindgren8

12:21 PM

Can we manually create the stopping criteria of INLA?

Thank you! On Fri, Dec 13, 2024 at 7:34 PM Finn Lindgren <finn.l...@gmail.com> wrote: Just

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Can we manually create the stopping criteria of INLA?

Thank you! On Fri, Dec 13, 2024 at 7:34 PM Finn Lindgren <finn.l...@gmail.com> wrote: Just

12:21 PM

Eamonn o, … Håvard Rue3

2:02 AM

Specifying separate precision parameters for different groups - Spatial Model.

when both variances are unknown, but you know the group, you need to code this as having two

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Specifying separate precision parameters for different groups - Spatial Model.

when both variances are unknown, but you know the group, you need to code this as having two

2:02 AM

Ruby Ji, Håvard Rue2

1:53 AM

Nonlinear model in INLA

short answer: no maybe INLABRU can do this ? this is similar to multinomial data, which is rewritten

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Nonlinear model in INLA

short answer: no maybe INLABRU can do this ? this is similar to multinomial data, which is rewritten

1:53 AM

Ruby Ji, Håvard Rue2

1:50 AM

Lagged effects between variables

you can have y ~ y you just need to index the rhs differently, like y ~ yy data=data.frame(y,yy=c(0,y

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Lagged effects between variables

you can have y ~ y you just need to index the rhs differently, like y ~ yy data=data.frame(y,yy=c(0,y

1:50 AM

TheCorinna1994, Finn Lindgren3

Dec 12

Priors on AR(1) in spatio temporal model

Dear Finn, what did work better now was the following implementation: eg Rain_mean~ -1+Intercept+

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Priors on AR(1) in spatio temporal model

Dear Finn, what did work better now was the following implementation: eg Rain_mean~ -1+Intercept+

Dec 12

Alokesh Manna, … Helpdesk (Haavard Rue)8

Dec 11

INLA initial value as fixed

Thanks for the explanation. On Wed, Dec 11, 2024 at 2:13 AM Helpdesk (Haavard Rue) <help@r-inla.

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INLA initial value as fixed

Thanks for the explanation. On Wed, Dec 11, 2024 at 2:13 AM Helpdesk (Haavard Rue) <help@r-inla.

Dec 11

Ruby Ji, Helpdesk (Haavard Rue)10

Dec 10

Hyperparameters for f(spde, control.group(rw1))

This makes sense. Thank you for your clarification! On Monday, December 9, 2024 at 12:30:20 AM UTC-8

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Hyperparameters for f(spde, control.group(rw1))

This makes sense. Thank you for your clarification! On Monday, December 9, 2024 at 12:30:20 AM UTC-8

Dec 10

Thomas Hsiao, Helpdesk (Haavard Rue)2

Dec 10

ARM64-compatible INLA

Currently its not compiled for ARM64, as no-one has asked for it before. I do not have access to a

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ARM64-compatible INLA

Currently its not compiled for ARM64, as no-one has asked for it before. I do not have access to a

Dec 10

Erin B, … Finn Lindgren15

Dec 9

Space-time model covariate

Yes; the trick is that the general answer is “yes, you can do various things involving those aspects”

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Space-time model covariate

Yes; the trick is that the general answer is “yes, you can do various things involving those aspects”

Dec 9

Javier martin, Helpdesk (Haavard Rue)3

Dec 9

Questions About Large Differences Between DIC and WAIC

Thank you very much for your explanation. I will use the group-version of the CPO and consider the

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Questions About Large Differences Between DIC and WAIC

Thank you very much for your explanation. I will use the group-version of the CPO and consider the

Dec 9

Alokesh Manna, Helpdesk (Haavard Rue)2

Dec 7

INLA takes a long time even when the hyperparameters are fixed

can you upgrade to the most recent testing version and retry? INLA_24.12.06 On Sat, 2024-12-07 at 02:

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INLA takes a long time even when the hyperparameters are fixed

can you upgrade to the most recent testing version and retry? INLA_24.12.06 On Sat, 2024-12-07 at 02:

Dec 7

Alokesh Manna, Helpdesk (Haavard Rue)2

Dec 2

INLA download and running problem

you need to download and install another linux build, do inla.binary.install() and chose one

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INLA download and running problem

you need to download and install another linux build, do inla.binary.install() and chose one

Dec 2

Nov 27

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Nov 27

Ruby Ji, Helpdesk (Haavard Rue)2

Nov 27

Inquiry about speeding up a complicated model in INLA

parallelisation using OpenMP is included, and with larger models then num.threads="A:B" A =

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Inquiry about speeding up a complicated model in INLA

parallelisation using OpenMP is included, and with larger models then num.threads="A:B" A =

Nov 27

Helpdesk (Haavard Rue)2

Nov 27

Re: [r-inla] segfault on Linux HPC

aah, it fail on argument 'graph' which is a good one. this is the first in call, so its

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Re: [r-inla] segfault on Linux HPC

aah, it fail on argument 'graph' which is a good one. this is the first in call, so its

Nov 27

Alokesh Manna, … Havard Rue9

Nov 24

The problem should be resolved by upgrading R and using the testing version of R-INLA -- Håvard Rue

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The problem should be resolved by upgrading R and using the testing version of R-INLA -- Håvard Rue

Nov 24

Martin Emil Pettersen, INLA help2

Nov 24

Gaussian likelihood with variance parameter in mean.

This would need to be implemented as a new likelihood; please send a note with detailed math —

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Gaussian likelihood with variance parameter in mean.

This would need to be implemented as a new likelihood; please send a note with detailed math —

Nov 24

Houaga Isidore, Elias T. Krainski2

Nov 24

Question about building a mesh with a specified CRS

Hi, I was not able to reproduce your code, and could not open the two figures. I have a code to make

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Question about building a mesh with a specified CRS

Hi, I was not able to reproduce your code, and could not open the two figures. I have a code to make

Nov 24

Daniele Poggio, … Finn Lindgren3

Nov 22

Issue with zero-mean Matérn field in Log-Gaussian Cox Process using inlabru

One thing to note: Even if one used constr=TRUE, that would impose the constraint to the whole mesh,

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Issue with zero-mean Matérn field in Log-Gaussian Cox Process using inlabru

One thing to note: Even if one used constr=TRUE, that would impose the constraint to the whole mesh,

Nov 22

A. Winter, Helpdesk (Haavard Rue)2

Nov 22

Survival Spatial Model Error

The underlying reason is that the model does not fit well with the data, which cause the issues. What

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Survival Spatial Model Error

The underlying reason is that the model does not fit well with the data, which cause the issues. What

Nov 22

Alokesh Manna, Helpdesk (Haavard Rue)3

Nov 20

Other hyperpriors for INLA

> inla.doc("rprior") > inla.doc("expression") > inla.doc("table:

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Other hyperpriors for INLA

> inla.doc("rprior") > inla.doc("expression") > inla.doc("table:

Nov 20

Hannes Kuehnert, INLA help2

Nov 20

Running multiple copies of inla in parallel

Can u share to help@… so I can rerun it here? — Haavard Rue Helpdesk he...@r-inla.org On 20 Nov 2024

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Running multiple copies of inla in parallel

Can u share to help@… so I can rerun it here? — Haavard Rue Helpdesk he...@r-inla.org On 20 Nov 2024

Nov 20

Ruby Ji, Helpdesk (Haavard Rue)7

Nov 15

Configuring shared and distinct hyperparameters for two spatial fields

Hi Håvard, Thank you for your guidance and for sharing the resources! I've learned a lot from

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Configuring shared and distinct hyperparameters for two spatial fields

Hi Håvard, Thank you for your guidance and for sharing the resources! I've learned a lot from

Nov 15

Ruby Ji, Finn Lindgren3

Nov 15

control.group(model="ar1")

I see. I will try more strict prior to see if I can solve the rw1 issue. On Nov 14, 2024, at 11:34 PM

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control.group(model="ar1")

I see. I will try more strict prior to see if I can solve the rw1 issue. On Nov 14, 2024, at 11:34 PM

Nov 15

Nov 13

Can't predict the Linear predictor by using INLA

In the spatial statistics setting for 100 locations, I aim to compare predictions of the linear

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Can't predict the Linear predictor by using INLA

In the spatial statistics setting for 100 locations, I aim to compare predictions of the linear

Nov 13

Alokesh Manna, Helpdesk (Haavard Rue)2

Nov 13

Inla spatial varying coefficients are not exploring (oversmoothing?)

The results look a bit weird, you're right. I would rather think its something with data... its

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Inla spatial varying coefficients are not exploring (oversmoothing?)

The results look a bit weird, you're right. I would rather think its something with data... its

Nov 13

Ruby Ji, Helpdesk (Haavard Rue)3

Nov 10

Thank you. I will do a rerun. > On Nov 9, 2024, at 6:26 PM, Helpdesk (Haavard Rue) <help@r-inla

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Thank you. I will do a rerun. > On Nov 9, 2024, at 6:26 PM, Helpdesk (Haavard Rue) <help@r-inla

Nov 10

Virgilio Gómez Rubio, … Tim Meehan17

Nov 8

Isotonic regression

Thanks, Håvard! I'll give that a try. On Tuesday, November 5, 2024 at 12:33:43 PM UTC-7 INLA help

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Isotonic regression

Thanks, Håvard! I'll give that a try. On Tuesday, November 5, 2024 at 12:33:43 PM UTC-7 INLA help

Nov 8

Getachew Dejene

Nov 7

Hello R-INLA Community,

Hello R-INLA Community, I'm working with a "spatio-temporal" dataset structured as

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Hello R-INLA Community,

Hello R-INLA Community, I'm working with a "spatio-temporal" dataset structured as

Nov 7

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