R-inla discussion group

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Welcome to this discussion group about r-inla. Please ask your questions here in case you think they will be useful for others, otherwise send them to help@r-inla.org. You are of'course free to comment on questions from others as well.

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Kyle Manning, Finn Lindgren5

Aug 16

AR terms for unbalanced panel data

You need to think of the model as something that exists regardless of whether it's being observed

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AR terms for unbalanced panel data

You need to think of the model as something that exists regardless of whether it's being observed

Aug 16

Ben Marcek, … Tim Meehan5

Aug 16

estimate mean and 95% CrI with linear combinations

Hi Ben, Sounds like you are headed toward a spatial model, and that it will morph into a spatial

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estimate mean and 95% CrI with linear combinations

Hi Ben, Sounds like you are headed toward a spatial model, and that it will morph into a spatial

Aug 16

JJ Hubbard, INLA help4

Aug 16

How to diagnose cause of singular matrices?

Add verbose=T and look at the parameter in the optimization. I guess one of them go high. The name of

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How to diagnose cause of singular matrices?

Add verbose=T and look at the parameter in the optimization. I guess one of them go high. The name of

Aug 16

shayeste alinia, Helpdesk2

Aug 16

**Error in inla.call.builtin() : INLA installation error; no such file***

On Tue, 2022-08-16 at 04:39 +0430, shayeste alinia wrote: > > ***Error in inla.call.builtin() :

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**Error in inla.call.builtin() : INLA installation error; no such file***

On Tue, 2022-08-16 at 04:39 +0430, shayeste alinia wrote: > > ***Error in inla.call.builtin() :

Aug 16

Tim Meehan, … John Molitor9

Aug 15

Aerial space-time interaction model

Great conversation on interaction models (and highly relevant to my current work). One thought I had

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Aerial space-time interaction model

Great conversation on interaction models (and highly relevant to my current work). One thought I had

Aug 15

JJ Hubbard, INLA help2

Aug 15

Up to date Windows Build instructions

Not really. I cross compile it on Linux using native windows gcc running with wine Get Outlook for

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Up to date Windows Build instructions

Not really. I cross compile it on Linux using native windows gcc running with wine Get Outlook for

Aug 15

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Aug 15

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Aug 15

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Aug 14

lyh...@gmail.com

Aug 13

Difficulties in specifying the Q function of SMA (spatial moving average process) using rgeneric

Hi INLA groups, I meet some difficulties in specifying SMA process-based random intercept models. The

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Difficulties in specifying the Q function of SMA (spatial moving average process) using rgeneric

Hi INLA groups, I meet some difficulties in specifying SMA process-based random intercept models. The

Aug 13

JJ Hubbard, … Finn Lindgren20

Aug 12

Is it possible to add an Autoregressive term for panel time series data?

The replicate model will include all indices from 1 to max(replicate), regardless of which ones have

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Is it possible to add an Autoregressive term for panel time series data?

The replicate model will include all indices from 1 to max(replicate), regardless of which ones have

Aug 12

James Cranston, INLA help6

Aug 12

Is it possible to create a graph file for INLA containing region names

Yes. No names, only integers 1:n Get Outlook for iOS From: r-inla-discussion-group@googlegroups.com

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Is it possible to create a graph file for INLA containing region names

Yes. No names, only integers 1:n Get Outlook for iOS From: r-inla-discussion-group@googlegroups.com

Aug 12

wang dali, Finn Lindgren4

Aug 12

It is possible to develop a shiny app base on shiny-server by using INLA

Hi, the pardiso-license is tied to a specific username I think; I'm not sure what the "

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It is possible to develop a shiny app base on shiny-server by using INLA

Hi, the pardiso-license is tied to a specific username I think; I'm not sure what the "

Aug 12

Noah Silverman, Finn Lindgren2

Aug 12

Interpreatation of CPO

For continuous variables p(y_i|y_{-i}) is a density, not a probability, so the values are not bounded

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Interpreatation of CPO

For continuous variables p(y_i|y_{-i}) is a density, not a probability, so the values are not bounded

Aug 12

Aug 11

Interpretation of strange posterior standard deviations

Hello, I've been modeling a variable with a lognormal distribution by using family="

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Interpretation of strange posterior standard deviations

Hello, I've been modeling a variable with a lognormal distribution by using family="

Aug 11

Boris Espinasse, Finn Lindgren13

Aug 11

grid cells occupied by data

"Zero" is a both easy and technically accurate answer to the question. ;) But the reviewer

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grid cells occupied by data

"Zero" is a both easy and technically accurate answer to the question. ;) But the reviewer

Aug 11

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Aug 10

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Aug 10

Elias T. Krainski

Aug 9

Re: [r-inla] adding hierarchy level of hyper-hyperparameter

Hi On your question "1. I would like to add an additional hierarchy level where the

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Re: [r-inla] adding hierarchy level of hyper-hyperparameter

Hi On your question "1. I would like to add an additional hierarchy level where the

Aug 9

Sylvan Benaksas, Elias T. Krainski2

Aug 9

Poorly Fitting Model

Hi, From my litle experience with this kind of data this kind of result is not rare. Since depth is

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Poorly Fitting Model

Hi, From my litle experience with this kind of data this kind of result is not rare. Since depth is

Aug 9

Leon Zheng, … Helpdesk14

Aug 7

Fail to get good enough initial values.

run with option inla(..., verbose=TRUE) and check the output in the optimization On Fri, 2022-08-05

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Fail to get good enough initial values.

run with option inla(..., verbose=TRUE) and check the output in the optimization On Fri, 2022-08-05

Aug 7

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Aug 7

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Aug 7

Amelie Liese, … Finn Lindgren6

Aug 6

Distribution assumption of latent spatial field

Hi, No, the lognormal observation model already applies a log-link by default (ie an exponential

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Distribution assumption of latent spatial field

Hi, No, the lognormal observation model already applies a log-link by default (ie an exponential

Aug 6

Ben Thompson, INLA help8

Aug 5

Hierarchical binomial model

Try with inla.setOption(inla.mode='experimental') Get Outlook for iOS From: Ben Thompson <

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Hierarchical binomial model

Try with inla.setOption(inla.mode='experimental') Get Outlook for iOS From: Ben Thompson <

Aug 5

Ben Marcek, … Finn Lindgren5

Aug 5

changes in effective parameters for gamma hurdle model

Hello, I wanted to thank you for the helpful tips. It took me a little while to get back to running

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changes in effective parameters for gamma hurdle model

Hello, I wanted to thank you for the helpful tips. It took me a little while to get back to running

Aug 5

Balaji Raman, Tim Meehan2

Aug 5

a new R-INLA book on dynamic time series

Thanks! Looks like a great book! On Thursday, August 4, 2022 at 9:33:17 PM UTC-6 balaji...@gmail.com

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a new R-INLA book on dynamic time series

Thanks! Looks like a great book! On Thursday, August 4, 2022 at 9:33:17 PM UTC-6 balaji...@gmail.com

Aug 5

Maria, Helpdesk3

Aug 5

Variance/precisions of structured random effects

Hi, Thank you very much for your feedback. I am new in INLA and Bayesian inference. I understand that

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Variance/precisions of structured random effects

Hi, Thank you very much for your feedback. I am new in INLA and Bayesian inference. I understand that

Aug 5

Helpdesk, … Amelie Liese6

Aug 4

Re: [r-inla] adding hierarchy level of Hyper-Hyperparameter

Thank you for the link! Is the code for the paper of the second link also available? I could just

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Re: [r-inla] adding hierarchy level of Hyper-Hyperparameter

Thank you for the link! Is the code for the paper of the second link also available? I could just

Aug 4

Amelie Liese, Finn Lindgren3

Aug 4

Problems plotting projected spherical data

Thanks! Problem solved! finn.l...@gmail.com schrieb am Mittwoch, 3. August 2022 um 18:26:37 UTC+2:

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Problems plotting projected spherical data

Thanks! Problem solved! finn.l...@gmail.com schrieb am Mittwoch, 3. August 2022 um 18:26:37 UTC+2:

Aug 4

Amelie Liese, Finn Lindgren7

Aug 4

shifted-lognormal distributed data

Hi Finn, Thank you for the link to the paper and for the explanations. I now realized my mistake! The

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shifted-lognormal distributed data

Hi Finn, Thank you for the link to the paper and for the explanations. I now realized my mistake! The

Aug 4

Sylvan Benaksas, Finn Lindgren7

Aug 4

Tweedie model error when making predictions with inla.group

Yes, you can't have missing values in your covariate. Finn On Thu, 4 Aug 2022, 16:08 Sylvan

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Tweedie model error when making predictions with inla.group

Yes, you can't have missing values in your covariate. Finn On Thu, 4 Aug 2022, 16:08 Sylvan

Aug 4

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