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Welcome to this discussion group about r-inla. Please ask your questions here in case you think they will be useful for others, otherwise send them to
help@r-inla.org
. You are of'course free to comment on questions from others as well.
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Felipe Barletta
,
Finn Lindgren
6
1:06 PM
Negative LCPO
Then it depends on whether your observation model is discrete or continuous. Finn On Fri, 13 Dec 2024
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Negative LCPO
Then it depends on whether your observation model is discrete or continuous. Finn On Fri, 13 Dec 2024
1:06 PM
Alokesh Manna
, …
Finn Lindgren
8
12:21 PM
Can we manually create the stopping criteria of INLA?
Thank you! On Fri, Dec 13, 2024 at 7:34 PM Finn Lindgren <finn.l...@gmail.com> wrote: Just
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Can we manually create the stopping criteria of INLA?
Thank you! On Fri, Dec 13, 2024 at 7:34 PM Finn Lindgren <finn.l...@gmail.com> wrote: Just
12:21 PM
Eamonn o
, …
Håvard Rue
3
2:02 AM
Specifying separate precision parameters for different groups - Spatial Model.
when both variances are unknown, but you know the group, you need to code this as having two
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Specifying separate precision parameters for different groups - Spatial Model.
when both variances are unknown, but you know the group, you need to code this as having two
2:02 AM
Ruby Ji
,
Håvard Rue
2
1:53 AM
Nonlinear model in INLA
short answer: no maybe INLABRU can do this ? this is similar to multinomial data, which is rewritten
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Nonlinear model in INLA
short answer: no maybe INLABRU can do this ? this is similar to multinomial data, which is rewritten
1:53 AM
Ruby Ji
,
Håvard Rue
2
1:50 AM
Lagged effects between variables
you can have y ~ y you just need to index the rhs differently, like y ~ yy data=data.frame(y,yy=c(0,y
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Lagged effects between variables
you can have y ~ y you just need to index the rhs differently, like y ~ yy data=data.frame(y,yy=c(0,y
1:50 AM
TheCorinna1994
,
Finn Lindgren
3
Dec 12
Priors on AR(1) in spatio temporal model
Dear Finn, what did work better now was the following implementation: eg Rain_mean~ -1+Intercept+
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Priors on AR(1) in spatio temporal model
Dear Finn, what did work better now was the following implementation: eg Rain_mean~ -1+Intercept+
Dec 12
Alokesh Manna
, …
Helpdesk (Haavard Rue)
8
Dec 11
INLA initial value as fixed
Thanks for the explanation. On Wed, Dec 11, 2024 at 2:13 AM Helpdesk (Haavard Rue) <help@r-inla.
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INLA initial value as fixed
Thanks for the explanation. On Wed, Dec 11, 2024 at 2:13 AM Helpdesk (Haavard Rue) <help@r-inla.
Dec 11
Ruby Ji
,
Helpdesk (Haavard Rue)
10
Dec 10
Hyperparameters for f(spde, control.group(rw1))
This makes sense. Thank you for your clarification! On Monday, December 9, 2024 at 12:30:20 AM UTC-8
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Hyperparameters for f(spde, control.group(rw1))
This makes sense. Thank you for your clarification! On Monday, December 9, 2024 at 12:30:20 AM UTC-8
Dec 10
Thomas Hsiao
,
Helpdesk (Haavard Rue)
2
Dec 10
ARM64-compatible INLA
Currently its not compiled for ARM64, as no-one has asked for it before. I do not have access to a
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ARM64-compatible INLA
Currently its not compiled for ARM64, as no-one has asked for it before. I do not have access to a
Dec 10
Erin B
, …
Finn Lindgren
15
Dec 9
Space-time model covariate
Yes; the trick is that the general answer is “yes, you can do various things involving those aspects”
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Space-time model covariate
Yes; the trick is that the general answer is “yes, you can do various things involving those aspects”
Dec 9
Javier martin
,
Helpdesk (Haavard Rue)
3
Dec 9
Questions About Large Differences Between DIC and WAIC
Thank you very much for your explanation. I will use the group-version of the CPO and consider the
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Questions About Large Differences Between DIC and WAIC
Thank you very much for your explanation. I will use the group-version of the CPO and consider the
Dec 9
Alokesh Manna
,
Helpdesk (Haavard Rue)
2
Dec 7
INLA takes a long time even when the hyperparameters are fixed
can you upgrade to the most recent testing version and retry? INLA_24.12.06 On Sat, 2024-12-07 at 02:
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INLA takes a long time even when the hyperparameters are fixed
can you upgrade to the most recent testing version and retry? INLA_24.12.06 On Sat, 2024-12-07 at 02:
Dec 7
Alokesh Manna
,
Helpdesk (Haavard Rue)
2
Dec 2
INLA download and running problem
you need to download and install another linux build, do inla.binary.install() and chose one
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INLA download and running problem
you need to download and install another linux build, do inla.binary.install() and chose one
Dec 2
Addy Man
Nov 27
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((Telegram : Clonecardeepweb))BUY 100% UNDETECTED COUNTERFEIT MONEY ONLINE, EURO BANKNOTES. GBP UK POUNDS STERLING, DOLLARS, Text/calls(520)783-5538
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Nov 27
Ruby Ji
,
Helpdesk (Haavard Rue)
2
Nov 27
Inquiry about speeding up a complicated model in INLA
parallelisation using OpenMP is included, and with larger models then num.threads="A:B" A =
unread,
Inquiry about speeding up a complicated model in INLA
parallelisation using OpenMP is included, and with larger models then num.threads="A:B" A =
Nov 27
Helpdesk (Haavard Rue)
2
Nov 27
Re: [r-inla] segfault on Linux HPC
aah, it fail on argument 'graph' which is a good one. this is the first in call, so its
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Re: [r-inla] segfault on Linux HPC
aah, it fail on argument 'graph' which is a good one. this is the first in call, so its
Nov 27
Alokesh Manna
, …
Havard Rue
9
Nov 24
GSL error
The problem should be resolved by upgrading R and using the testing version of R-INLA -- Håvard Rue
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GSL error
The problem should be resolved by upgrading R and using the testing version of R-INLA -- Håvard Rue
Nov 24
Martin Emil Pettersen
,
INLA help
2
Nov 24
Gaussian likelihood with variance parameter in mean.
This would need to be implemented as a new likelihood; please send a note with detailed math —
unread,
Gaussian likelihood with variance parameter in mean.
This would need to be implemented as a new likelihood; please send a note with detailed math —
Nov 24
Houaga Isidore
,
Elias T. Krainski
2
Nov 24
Question about building a mesh with a specified CRS
Hi, I was not able to reproduce your code, and could not open the two figures. I have a code to make
unread,
Question about building a mesh with a specified CRS
Hi, I was not able to reproduce your code, and could not open the two figures. I have a code to make
Nov 24
Daniele Poggio
, …
Finn Lindgren
3
Nov 22
Issue with zero-mean Matérn field in Log-Gaussian Cox Process using inlabru
One thing to note: Even if one used constr=TRUE, that would impose the constraint to the whole mesh,
unread,
Issue with zero-mean Matérn field in Log-Gaussian Cox Process using inlabru
One thing to note: Even if one used constr=TRUE, that would impose the constraint to the whole mesh,
Nov 22
A. Winter
,
Helpdesk (Haavard Rue)
2
Nov 22
Survival Spatial Model Error
The underlying reason is that the model does not fit well with the data, which cause the issues. What
unread,
Survival Spatial Model Error
The underlying reason is that the model does not fit well with the data, which cause the issues. What
Nov 22
Alokesh Manna
,
Helpdesk (Haavard Rue)
3
Nov 20
Other hyperpriors for INLA
> inla.doc("rprior") > inla.doc("expression") > inla.doc("table:
unread,
Other hyperpriors for INLA
> inla.doc("rprior") > inla.doc("expression") > inla.doc("table:
Nov 20
Hannes Kuehnert
,
INLA help
2
Nov 20
Running multiple copies of inla in parallel
Can u share to help@… so I can rerun it here? — Haavard Rue Helpdesk he...@r-inla.org On 20 Nov 2024
unread,
Running multiple copies of inla in parallel
Can u share to help@… so I can rerun it here? — Haavard Rue Helpdesk he...@r-inla.org On 20 Nov 2024
Nov 20
Ruby Ji
,
Helpdesk (Haavard Rue)
7
Nov 15
Configuring shared and distinct hyperparameters for two spatial fields
Hi Håvard, Thank you for your guidance and for sharing the resources! I've learned a lot from
unread,
Configuring shared and distinct hyperparameters for two spatial fields
Hi Håvard, Thank you for your guidance and for sharing the resources! I've learned a lot from
Nov 15
Ruby Ji
,
Finn Lindgren
3
Nov 15
control.group(model="ar1")
I see. I will try more strict prior to see if I can solve the rw1 issue. On Nov 14, 2024, at 11:34 PM
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control.group(model="ar1")
I see. I will try more strict prior to see if I can solve the rw1 issue. On Nov 14, 2024, at 11:34 PM
Nov 15
Jin Hyung Lee
Nov 13
Can't predict the Linear predictor by using INLA
In the spatial statistics setting for 100 locations, I aim to compare predictions of the linear
unread,
Can't predict the Linear predictor by using INLA
In the spatial statistics setting for 100 locations, I aim to compare predictions of the linear
Nov 13
Alokesh Manna
,
Helpdesk (Haavard Rue)
2
Nov 13
Inla spatial varying coefficients are not exploring (oversmoothing?)
The results look a bit weird, you're right. I would rather think its something with data... its
unread,
Inla spatial varying coefficients are not exploring (oversmoothing?)
The results look a bit weird, you're right. I would rather think its something with data... its
Nov 13
Ruby Ji
,
Helpdesk (Haavard Rue)
3
Nov 10
INLA warning
Thank you. I will do a rerun. > On Nov 9, 2024, at 6:26 PM, Helpdesk (Haavard Rue) <help@r-inla
unread,
INLA warning
Thank you. I will do a rerun. > On Nov 9, 2024, at 6:26 PM, Helpdesk (Haavard Rue) <help@r-inla
Nov 10
Virgilio Gómez Rubio
, …
Tim Meehan
17
Nov 8
Isotonic regression
Thanks, Håvard! I'll give that a try. On Tuesday, November 5, 2024 at 12:33:43 PM UTC-7 INLA help
unread,
Isotonic regression
Thanks, Håvard! I'll give that a try. On Tuesday, November 5, 2024 at 12:33:43 PM UTC-7 INLA help
Nov 8
Getachew Dejene
Nov 7
Hello R-INLA Community,
Hello R-INLA Community, I'm working with a "spatio-temporal" dataset structured as
unread,
Hello R-INLA Community,
Hello R-INLA Community, I'm working with a "spatio-temporal" dataset structured as
Nov 7