Installing Cardinal Workflows

6 views
Skip to first unread message

Shadrack Mutuku

unread,
Apr 18, 2017, 11:18:01 PM4/18/17
to R-help-archive
I have successfully installed the cardinal package but having issues installing cardinal workflows.  I am getting the following error message on my console:

Bioconductor version 3.4 (BiocInstaller 1.24.0), ?biocLite for help
> biocLite("CardinalWorkflows")
Using Bioconductor 3.4 (BiocInstaller 1.24.0), R 3.3.3 (2017-03-06).
Installing package(s) ‘CardinalWorkflows’
installing the source package ‘CardinalWorkflows’

Content type 'application/x-gzip' length 150031609 bytes (143.1 MB)
downloaded 143.1 MB

'C:\Program' is not recognized as an internal or external command,
operable program or batch file.

The downloaded source packages are in
‘C:\Users\a1708277\AppData\Local\Temp\RtmpIbY3aM\downloaded_packages’
installation path not writeable, unable to update packages: cluster, lattice,
  survival
Warning messages:
1: running command '"C:/Program Files/R/R-3.3.3/bin/x64/R" CMD INSTALL -l "\\UOFA\USERS$\users7\a1708277\R\win-library\3.3" C:\Users\a1708277\AppData\Local\Temp\RtmpIbY3aM/downloaded_packages/CardinalWorkflows_1.6.0.tar.gz' had status 1 
2: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘CardinalWorkflows’ had non-zero exit status
> library(CardinalWorkflows)
Error in library(CardinalWorkflows) : 
  there is no package called ‘CardinalWorkflows’

Please help. Thanks

Jeff Newmiller

unread,
Apr 19, 2017, 2:22:32 AM4/19/17
to r-h...@r-project.org, Shadrack Mutuku, R-help-archive
See http://bfy.tw/BIkn

For next time I recommend reading the Posting Guide mentioned in the footer of this and every post on this list.
--
Sent from my phone. Please excuse my brevity.

>*Please help. Thanks*
>______________________________________________
>R-h...@r-project.org mailing list -- To UNSUBSCRIBE and more, see
>https://stat.ethz.ch/mailman/listinfo/r-help
>PLEASE do read the posting guide
>http://www.R-project.org/posting-guide.html
>and provide commented, minimal, self-contained, reproducible code.

______________________________________________
R-h...@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

Reply all
Reply to author
Forward
0 new messages