Thanks you
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imo, it is not as important to have pci mouse as it is for keyboard. I just use a usb to pci adapter for keyboard. and Use a usb mouse with the qubes mouse proxy from usbvm. For extra security set lockscreen.
I believe its automatic now, you just plug in the mouse and a message should appear on screen asking you to allow it. https://github.com/QubesOS/qubes-app-linux-input-proxy