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You can certainly have a secondary encrypted HDD and carry it over
from a previous installation to a new Qubes installation. I did this
myself recently when installing 3.2. I simply didn't touch the
encrypted HDD during my installation.
However, your case sounds different. It sounds like want to both (a)
use this HDD as an installation target for Qubes and (b) keep a
pre-existing encrypted volume on it. In principle, this should be OK,
as long as you're careful not to overwrite the encrypted volume with
your new Qubes installation. You may want to do some manual
partitioning before presenting this disk to the Qubes installer.
- --
Andrew David Wong (Axon)
Community Manager, Qubes OS
https://www.qubes-os.org
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