Intensity on the detector for probing a point
Tara Mishra
I am quite new to qSTEM. I am wondering is there any way by which the intensity of an atomic column can be calculated as a function of the sample thickness.
Thank you,
Regards
Tara
Christoph Koch
Hi Tara,
you can set the number of ‘slices between outputs’ to a value lower than the total number of slices. This will yield intermediate STEM images at thickness intervals of slice thickness * number of slices between outputs.
You can then use the plugin FRWRtools (also on my website), create a stack of the simulated STEM images using “FRWRTools:Create Stack:Read stack .img”, select the area over which you want to integrate, and use the menu item “FRWRTools:Volume Tools:Extract ‘Spectrum’” to produce a plot of the integrated intensity as a function of thickness.
With best regards,
Christoph.
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