Hello Hui,
yes, in the config file you simply need to define the A-atoms with an occupancy of 1-x and the B atoms with occupancy x and give them the exact same position. There are now two options how the simulation is run if you include TDS in your simulation (without TDS both options will yield equivalent results):
1) If you want to simulate the average image, then you simply generate the super cell within qstem itself (either box mode or replication of unit cells). For each TDS run, the atom positions will be distributed between A and B randomly. So each TDS run sees a different configuration, but with the same statistical occupancy of A and B.
2) If you want to generate a single (random) configuration and only thermally displace the atoms in that, you should generate the super cell in the qstem model builder, and then load the complete super cell into qstem. Qstem will then only wobble the atoms about their positions, but will not re-evaluate the occupancy again.
More on this can be found in the description of the .cfg file format on qstem.org
Best regards,
Christoph.
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No, you should provide a Debye-Waller factor at the 4th position. Leaving a space will not work. You canm compute the default Debye-Waller factor according to the equation provided at this website: https://www.physics.hu-berlin.de/en/sem/software/data-formats
With best regards,