LEfSe : Plot LEfSe results

[Sandya Rani]

Hi all,

    I am doing LEfSe analysis and in the plot LEfSe step. Can someone help me in getting the LDA score from -6 to 6 in the diagram.  I am getting 5 to -3. the figure is below. Thanks.

[TonyWalters]

Hello Sandya,

You might have better luck asking in this forum for Lefse: https://groups.google.com/forum/#!forum/lefse-users

I don't see options on the galaxy tool for setting specific levels in the output plot-I'm guessing that it's not possible on the web-based tool. You might have better luck with a local install though.

-Tony

[Sandya Rani]

Ok. Thank you for the reply..