assign_taxonomy.py: error

[Luz Chacón Jiménez]

Hi!

I need your help.

I was doing pick_open_reference_otus.py but the program couldn't do the step 5. I obtained this error "assign_taxonomy.py: error: --id_to_taxonomy_fp is required when assigning with uclust"

I'm using the latest version of Biolinux.

Thanks!


Luz

[TonyWalters]

Hello, the # in front of the taxonomy mapping in the log file makes it look like this issue: https://groups.google.com/forum/#!searchin/qiime-forum/$20$27$23$20$2Fusr$2Fshare$2Fqiime$2Fdata$2Fgg_13_8_otus$2Ftaxonomy$2F97_otu_taxonomy.txt$27/qiime-forum/4XuyvjwAdmo/O4e4UE6WnwUJ

Can you what was done with the .qiime_config file in that post and see if it fixes it for you?

[Luz Chacón Jiménez]

It works!!!!

Thanks so much!!!!