Hey Colin,
I actually tried that before and it still didint work. Sometimes when i leave my computer on and it goes to sleep, the Virtual MAchine requires a password to login and using qiime doesn't work for that either.
I was considering installing natively. But im having a hard time with that as well,but this is what i get: when i time print_qiime_config.py -t:
aniel@daniel-HP-Pavilion-g6-Notebook-PC:~/Desktop$ print_qiime_config.py -t
Traceback (most recent call last):
File "/usr/local/bin/print_qiime_config.py", line 57, in <module>
raise ImportError("%s\n%s" % (e, core_dependency_missing_msg))
ImportError: cannot import name HAVE_H5PY
See the QIIME Installation Guide:
http://qiime.org/install/install.html