print_qiime_config.py (QIIME-1.9.1)

[ravibiokr]

Hello QIIME Team,

Wishes and greeting for your great support

I have used QIIME-1.8.0 and analysed microbiome data successfully 

But I have problem with QIIME-1.9.1 Virtual machine  as follows 

print_qiime_config.py 

Traceback (most recent call last):

  File "/usr/local/bin/print_qiime_config.py", line 28, in <module>

    raise ImportError("%s\n%s" % (e, core_dependency_missing_msg))

ImportError: liblapack.so.3gf: cannot open shared object file: No such file or directory

See the QIIME Installation Guide: http://qiime.org/install/install.html

Could you explain and resolve the issue 

Thank you 

Ravi

[Jai Ram Rideout]

Hi Ravi,

Is your host machine (the one you have VirtualBox installed on) 64-bit or 32-bit? We only support 64-bit host machines. Also, after loading the QIIME 1.9.1 virtualbox, did you upgrade any of the software within it? For example, did you run any "sudo apt-get" commands or "pip install" commands? Those types of commands could break the QIIME 1.9.1 install.

Best,

Jai

[ravibiokr]

Dear Jai

Thank you for your information.

Yes my host machine is Windows 64-bit only. Also I used sudo apt-get to update.

So, is there any ways to use QIIME 1.9.1 virtualbox?

Thank you

 

Ravi

[Jai Ram Rideout]

Hi Ravi,

Can you download a fresh copy of the QIIME 1.9.1 VirtualBox, boot it up, and run print_qiime_config.py? Please avoid running any updates in the virtualbox, and let's see if that resolves the issue.

Best,

Jai