Collection of Errors and solutions of install QIIME in VMware + Ubuntu

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liu bin

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Nov 6, 2015, 3:09:25 AM11/6/15
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Recently, I installed QIIME in over 3 computers, and this article summarize experiences for all the ERRORS and solutions.

workflow:
1, install VMware;
2, install Ubuntu virtual machine;

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Error 1: 
"pip install fail: command "python setup.py egg-info" failed with error code 1 in /tmp/...../matplotlib.

Solution: 
sudo apt-get install python-matplotlib

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Error 2:
"python postgresql-server-dev-X.Y"

Solution:
sudo apt-get install postgresql-9.1
sudo apt-get install python-psycopg2
sudo apt-get install libpq-dev

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Error 3:
"SSLError: the read operation timeout"

Solution:
pip --default-timeout=100 install django

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Error 4:
"scipy error..."

Solution:
sudo apt-get install python-pip python-dev build-essential libatlas-base-dev gfortran

######################

Hope these will help !



Kyle Bittinger

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Nov 6, 2015, 7:21:53 AM11/6/15
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Thanks for posting!
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