problem with metadata file

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mmlope...@gmail.com

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May 24, 2018, 1:27:57 PM5/24/18
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Hello,

I just started working with qiime2. I was able to format the data into a .qza format succesfully. However, when I try to use the 'qiime feature-table summarize' function I get the following error about my metadata file:

"There was an issue with loading the file bee_metadata-test.tsv as metadata:

  Metadata file path doesn't exist, or the path points to something other than a file. Please check that the path exists, has read permissions, and points to a regular file (not a directory): bee_metadata-test.tsv

  There may be more errors present in the metadata file. To get a full report, sample/feature metadata files can be validated with Keemei: https://keemei.qiime2.org

  Find details on QIIME 2 metadata requirements here: https://docs.qiime2.org/2018.4/tutorials/metadata/"

I already checked the metadata file in Keemei, and it reports no errors. I am sure I am using a file not a directory. Are there any other potential sources linked to this error. 

Metadata file is attached in case that is helpful solving this problem.

Thanks in advance!

Margarita


bee_metadata_test.tsv

Colin Brislawn

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May 25, 2018, 11:07:09 AM5/25/18
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Hello Margarita,

Your metadata looks OK. I'm not totally sure what's causing this error.

I think you would have more luck posting to the Qiime 2 forums, so the Qiime 2 developers can take a look and help you solve this issue.

Colin


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