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PONTZEN, ANDREW P.
Jun 24
Pynbody 2.2.0: support for Windows 🎇
Dear all, On several occasions over the last few years, people have requested Windows support for
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Pynbody 2.2.0: support for Windows 🎇
Dear all, On several occasions over the last few years, people have requested Windows support for
Jun 24
PONTZEN, ANDREW P.
Jun 10
Bug in luminosity calculations affecting pynbody v2.0.0 to v2.1.2
Dear all, I'm writing to alert you to a significant bug in pynbody v2.0.0 (released Dec 2024)
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Bug in luminosity calculations affecting pynbody v2.0.0 to v2.1.2
Dear all, I'm writing to alert you to a significant bug in pynbody v2.0.0 (released Dec 2024)
Jun 10
Eric Tang
,
Andrew Pontzen
5
Jun 1
No halo catalogue found for GADGET2 snapshot
Hi Andrew, Noted with thanks. That works. Regards, Eric Sent from my iPhone On 29 May 2025, at 21:27,
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No halo catalogue found for GADGET2 snapshot
Hi Andrew, Noted with thanks. That works. Regards, Eric Sent from my iPhone On 29 May 2025, at 21:27,
Jun 1
Eric Tang
,
Andrew Pontzen
2
May 29
half_light_r() using LSST filters
Sorry, I would probably need more context around what precisely you've done leading up to the
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half_light_r() using LSST filters
Sorry, I would probably need more context around what precisely you've done leading up to the
May 29
Weixuan Pan
,
PONTZEN, ANDREW P.
2
Apr 4
Inquiry About Using pynbody for Halo Identification and Halo Mass Function
I'm afraid pynbody does not have a built-in halo finder, FoF or otherwise. You need to run an
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Inquiry About Using pynbody for Halo Identification and Halo Mass Function
I'm afraid pynbody does not have a built-in halo finder, FoF or otherwise. You need to run an
Apr 4
PONTZEN, ANDREW P.
2
12/12/24
Pynbody version 2
Dear all, Pynbody version 2 now has 'release' status meaning it will be the default if you
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Pynbody version 2
Dear all, Pynbody version 2 now has 'release' status meaning it will be the default if you
12/12/24
Thor Tepper-Garcia
,
Andrew Pontzen
5
9/10/24
Missing potential method ?
Hi Andrew, Many thanks for your reply, and for the advice. And sorry for the typos in my previous
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Missing potential method ?
Hi Andrew, Many thanks for your reply, and for the advice. And sorry for the typos in my previous
9/10/24
Thor
4/24/24
Generalised Fourier profile?
Hi Pynbody enthusiast, I'd like to calculate the Fourier amplitudes (m=0-6), not of the mass
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Generalised Fourier profile?
Hi Pynbody enthusiast, I'd like to calculate the Fourier amplitudes (m=0-6), not of the mass
4/24/24
Thor Tepper-Garcia
,
Pontzen, Andrew
4
2/22/24
Keyerror: "mass"
There needs to be a reproducible example, yes! Either upload the data somewhere of your choosing or
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Keyerror: "mass"
There needs to be a reproducible example, yes! Either upload the data somewhere of your choosing or
2/22/24
Rick Sarmento
2/7/24
interpreting the linear arrays for vel and other scalars
I'm trying to export a velocity array from a RAMSES snap (and subsnap -- a pyn Cuboid)... I do:
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interpreting the linear arrays for vel and other scalars
I'm trying to export a velocity array from a RAMSES snap (and subsnap -- a pyn Cuboid)... I do:
2/7/24
Kelly Holley-Bockelmann
,
Pontzen, Andrew
2
1/30/24
running SUBFIND within pynbody
Dear Kelly, Thanks for your kind words, this is always really nice to hear! If I understand you
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running SUBFIND within pynbody
Dear Kelly, Thanks for your kind words, this is always really nice to hear! If I understand you
1/30/24
Stuart Anderson
,
Andrew Pontzen
3
11/10/23
Centering a snapshot: OMP: Error #15: Initializing libomp.dylib,
OK I tried the environment thing and it didn't work. In the end I did a 'clean' uninstall
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Centering a snapshot: OMP: Error #15: Initializing libomp.dylib,
OK I tried the environment thing and it didn't work. In the end I did a 'clean' uninstall
11/10/23
Joakim Rosdahl
10/18/23
Building Galaxies from Scratch conference in Vienna
We are excited to announce that we are organising a conference on “Building Galaxies from Scratch:
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Building Galaxies from Scratch conference in Vienna
We are excited to announce that we are organising a conference on “Building Galaxies from Scratch:
10/18/23
Thor Tepper-Garcia
7/16/23
Passing arguments to profile
Hi, I may be drowning in a glass of water here, as it were, but I have not been able to find out how
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Passing arguments to profile
Hi, I may be drowning in a glass of water here, as it were, but I have not been able to find out how
7/16/23
Nolan McPhaul
,
Andrew Pontzen
3
6/27/23
Finding the 32 Nearest Gas Particles
Hi Nolan I'm afraid I have my hands very full with other projects at the moment and can't
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Finding the 32 Nearest Gas Particles
Hi Nolan I'm afraid I have my hands very full with other projects at the moment and can't
6/27/23
Nolan McPhaul
,
Greg Stinson
2
4/7/23
Re: Pynobody filt.Spheres are very slow all of a sudden?
Apologies for the flurry of messages, group. I guess I set up this mailing list years ago. Google
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Re: Pynobody filt.Spheres are very slow all of a sudden?
Apologies for the flurry of messages, group. I guess I set up this mailing list years ago. Google
4/7/23
Nolan McPhaul
,
Andrew Pontzen
2
4/4/23
Pynobody filt.Spheres are very slow all of a sudden?
Hi Nolan, I can't really say why it would have changed speed, sad to say, but the bottom line is
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Pynobody filt.Spheres are very slow all of a sudden?
Hi Nolan, I can't really say why it would have changed speed, sad to say, but the bottom line is
4/4/23
Nick Samaras
,
Pontzen, Andrew
6
2/8/23
pynbody can't load ahf file
Hi Nick It's hard to guess at what's going on here. You'll need to spell out clearly what
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pynbody can't load ahf file
Hi Nick It's hard to guess at what's going on here. You'll need to spell out clearly what
2/8/23
Eliza Diggins
, …
Andrew Pontzen
3
2/2/23
Most Efficient Approach to 1D profiles from RAMSES simulations
PS there is also the option to make a 3d grid (pynbody.sph.to_3d_grid if I remember correctly) which
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Most Efficient Approach to 1D profiles from RAMSES simulations
PS there is also the option to make a 3d grid (pynbody.sph.to_3d_grid if I remember correctly) which
2/2/23
Eliza Diggins
,
Pontzen, Andrew
2
1/29/23
Using Bridges with RAMSES data
Yes this is a strange case. The rather hidden problem is that o1.dm is a transitory object that has
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Using Bridges with RAMSES data
Yes this is a strange case. The rather hidden problem is that o1.dm is a transitory object that has
1/29/23
Eliza Diggins
,
Pontzen, Andrew
3
1/29/23
What's really going on when ValueError: The particles span a region larger than the specified boxsize?
I see! Thanks for the details! I think for my use-case its fine to just extend the boxsize. I use
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What's really going on when ValueError: The particles span a region larger than the specified boxsize?
I see! Thanks for the details! I think for my use-case its fine to just extend the boxsize. I use
1/29/23
Samuel Grima
,
Eliza Diggins
2
12/30/22
Subplots Not Working Properly
Hey Samuel, It would be most helpful if you could provide a code snippet which replicates the
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Subplots Not Working Properly
Hey Samuel, It would be most helpful if you could provide a code snippet which replicates the
12/30/22
Samuel Grima
,
Jeremy Bailin
2
12/24/22
2D vs 3D plots
Hi Samuel, A 3D profile divides the volume up into spherical shells binned by spherical radius r. A
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2D vs 3D plots
Hi Samuel, A 3D profile divides the volume up into spherical shells binned by spherical radius r. A
12/24/22
GANESH N
, …
Andrew Pontzen
3
11/18/22
s.halos() not working for RAMSES
I don't think AHF works with Ramses files, unfortunately. You'll probably need to use HOP,
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s.halos() not working for RAMSES
I don't think AHF works with Ramses files, unfortunately. You'll probably need to use HOP,
11/18/22
Eliza Diggins
,
Rubens Machado
3
11/10/22
Manipulating .g2 Files
Awesome! This is really helpful. This looks to be easily manipulable for my need! On Monday, November
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Manipulating .g2 Files
Awesome! This is really helpful. This looks to be easily manipulable for my need! On Monday, November
11/10/22
Eliza Diggins
,
Pontzen, Andrew
3
10/1/22
ValueError: Failed to make a sensible logarithmic image. This probably means there are no particles in the view.
Awesome! This worked flawlessly! Thank you so much! On Saturday, October 1, 2022 at 12:50:57 PM UTC-6
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ValueError: Failed to make a sensible logarithmic image. This probably means there are no particles in the view.
Awesome! This worked flawlessly! Thank you so much! On Saturday, October 1, 2022 at 12:50:57 PM UTC-6
10/1/22
Thor Tepper-Garcia
,
Pontzen, Andrew
5
9/25/22
Issue with Ramses + physical_units (Pynbody v1.2.3)
Dear Andrew, I confirm that the new version does solve the problem (as I mentioned in an earlier
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Issue with Ramses + physical_units (Pynbody v1.2.3)
Dear Andrew, I confirm that the new version does solve the problem (as I mentioned in an earlier
9/25/22
Thor Tepper-Garcia
9/21/22
Reading Ramses particle potential
Hi all, I'm writing out the particle potential to eg part_00001.out00001 (using the
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Reading Ramses particle potential
Hi all, I'm writing out the particle potential to eg part_00001.out00001 (using the
9/21/22
Nilanjana Nandi
8/12/22
h = s.halos() not working in pynbody
Hi. h = s.halos() is unable to detect the halos from the ramses output, both with or without the
unread,
h = s.halos() not working in pynbody
Hi. h = s.halos() is unable to detect the halos from the ramses output, both with or without the
8/12/22
Nilanjana Nandi
8/12/22
h = s.halos() not working in pynbody
Hi. h = s.halos() is unable to detect the halos from the ramses output, both with or without the
unread,
h = s.halos() not working in pynbody
Hi. h = s.halos() is unable to detect the halos from the ramses output, both with or without the
8/12/22