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pyControl
1–30 of 92
This is the old forum for users of the
pyControl
and
pyPhotometry
open source neuroscience tools. This group is now closed to new posts and user discussions are hosted on the github repositories for the projects at these links:
pyControl discussions
pyPhotometry discussions
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thoma...@gmail.com
1/4/23
pyControl and pyPhotometry user support moved to Github discussions
Hi All, User support and discussions about pyControl and pyPhotometry are moving to Github
unread,
pyControl and pyPhotometry user support moved to Github discussions
Hi All, User support and discussions about pyControl and pyPhotometry are moving to Github
1/4/23
HE Tan
,
thoma...@gmail.com
3
12/14/22
pyPhotometry: Triggering digital/analog output
I've made some changes to the code in the development (dev) branch on Github to ensure that if
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pyPhotometry: Triggering digital/analog output
I've made some changes to the code in the development (dev) branch on Github to ensure that if
12/14/22
Mostafa Safaie
,
thoma...@gmail.com
3
11/24/22
micropython shortage
Hi Thomas, Yes, we're using Andy's boards and my best guess so far is that somehow a voltage
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micropython shortage
Hi Thomas, Yes, we're using Andy's boards and my best guess so far is that somehow a voltage
11/24/22
thoma...@gmail.com
11/8/22
pyControl v1.8
pyControl version 1.8 is now available to download from the releases page. v1.8 Change log GUI: GUI
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pyControl v1.8
pyControl version 1.8 is now available to download from the releases page. v1.8 Change log GUI: GUI
11/8/22
YS L
, …
thoma...@gmail.com
6
10/18/22
Using PyPhotometry with National Instruments USB-DAQ card
Hi YS, The pyboard pins used by pyphotometry are: X5 : LED driver 1 output X6 : LED driver 2 output
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Using PyPhotometry with National Instruments USB-DAQ card
Hi YS, The pyboard pins used by pyphotometry are: X5 : LED driver 1 output X6 : LED driver 2 output
10/18/22
thoma...@gmail.com
10/7/22
pyControl version 1.8rc1
pyControl version 1.8rc1 is now available to download from the releases page. This is a release
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pyControl version 1.8rc1
pyControl version 1.8rc1 is now available to download from the releases page. This is a release
10/7/22
João Pedro Junqueira
, …
pyControl
4
10/4/22
Camera sync alternative; experiment data pickle loading
Hi Joao, Glad to hear you got the import code working. Regarding doing video acqusition and encoding
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Camera sync alternative; experiment data pickle loading
Hi Joao, Glad to hear you got the import code working. Regarding doing video acqusition and encoding
10/4/22
João Pedro Junqueira
,
Thomas Akam
9
9/4/22
Constant voltage from BNC/DAC ports
Hello Thomas, Understood! Thank you for the support. I'll try the replacement. Best, Joao. On
unread,
Constant voltage from BNC/DAC ports
Hello Thomas, Understood! Thank you for the support. I'll try the replacement. Best, Joao. On
9/4/22
João Pedro Junqueira
,
thoma...@neuro.fchampalimaud.org
6
7/29/22
Recording interrupt of a digital input
Hello, Thank you very much for the suggestions. I've tried disabling deboucing (used to be
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Recording interrupt of a digital input
Hello, Thank you very much for the suggestions. I've tried disabling deboucing (used to be
7/29/22
Patricia Gomes
,
thoma...@neuro.fchampalimaud.org
2
7/13/22
Sync pyphotometry and video capture with bonsai
Hi Patrícia, The standard way to sync pyPhotometry data with other systems is using sync pulses sent
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Sync pyphotometry and video capture with bonsai
Hi Patrícia, The standard way to sync pyPhotometry data with other systems is using sync pulses sent
7/13/22
João Pedro Junqueira
,
thoma...@neuro.fchampalimaud.org
4
7/3/22
Persistent variables; analog recording output
Hello, Thank you for the support. That update will be helpful. Best, Joao. On Thu, Jun 30, 2022 at 2:
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Persistent variables; analog recording output
Hello, Thank you for the support. That update will be helpful. Best, Joao. On Thu, Jun 30, 2022 at 2:
7/3/22
thoma...@neuro.fchampalimaud.org
6/30/22
pyControl v1.7.2 and pyPhotometry v0.3.1 released
New versions of pyControl and pyPhotometry are avaiable to download from their releases pages (here
unread,
pyControl v1.7.2 and pyPhotometry v0.3.1 released
New versions of pyControl and pyPhotometry are avaiable to download from their releases pages (here
6/30/22
Yifang Yuan
,
thoma...@neuro.fchampalimaud.org
4
6/13/22
pyPhotometry Figure3f
That makes sense, glad you were able to work out the discrepancy. On Monday, 13 June 2022 at 14:06:47
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pyPhotometry Figure3f
That makes sense, glad you were able to work out the discrepancy. On Monday, 13 June 2022 at 14:06:47
6/13/22
João Pedro Junqueira
,
thoma...@neuro.fchampalimaud.org
4
5/26/22
Integrating camera acquisition into pyControl
Hi Joao, Glad to hear you've got something working. In case you do want to make it work with
unread,
Integrating camera acquisition into pyControl
Hi Joao, Glad to hear you've got something working. In case you do want to make it work with
5/26/22
CGomes
,
thoma...@neuro.fchampalimaud.org
2
5/26/22
Error when running a task file with position tracking sensor
Hi, I think the issue is occurring because the MotionDetector_2ch class in the file sensor.py is
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Error when running a task file with position tracking sensor
Hi, I think the issue is occurring because the MotionDetector_2ch class in the file sensor.py is
5/26/22
thoma...@neuro.fchampalimaud.org
4/6/22
pyControl version 1.7 release
pyControl version 1.7 is now available to download from the releases page. This release adds new
unread,
pyControl version 1.7 release
pyControl version 1.7 is now available to download from the releases page. This release adds new
4/6/22
João Pedro Junqueira
,
thoma...@neuro.fchampalimaud.org
9
4/1/22
Importing ephys and video data for synchronisation
Hello, That's a good call! I'll get those T junctions ASAP. I guess those could also work for
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Importing ephys and video data for synchronisation
Hello, That's a good call! I'll get those T junctions ASAP. I guess those could also work for
4/1/22
黃竣玄
,
thoma...@neuro.fchampalimaud.org
3
3/11/22
Hardware about pyPhotometry
Thanks for your reply. I benefited a lot from it. thoma...@neuro.fchampalimaud.org 在 2022年3月9日 星期三上午1
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Hardware about pyPhotometry
Thanks for your reply. I benefited a lot from it. thoma...@neuro.fchampalimaud.org 在 2022年3月9日 星期三上午1
3/11/22
Julien Carponcy
,
thoma...@neuro.fchampalimaud.org
2
3/11/22
pycontrol / photometry integreation in Neurodata Without Border framework
Hi Julien, Thanks for raising this question. I am not aware of any work to integrate pyControl or
unread,
pycontrol / photometry integreation in Neurodata Without Border framework
Hi Julien, Thanks for raising this question. I am not aware of any work to integrate pyControl or
3/11/22
félix Leroy
, …
Yangfan Peng
5
3/8/22
How can we synchronize Pyphotometry recordings with a camera feed?
Thanks so much for the rapid reply! I will give this a try. On Tuesday, 8 March 2022 at 18:13:55 UTC
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How can we synchronize Pyphotometry recordings with a camera feed?
Thanks so much for the rapid reply! I will give this a try. On Tuesday, 8 March 2022 at 18:13:55 UTC
3/8/22
thoma...@neuro.fchampalimaud.org
2/4/22
pyControl hardware on Labmaker
I'm delighted to say that another supplier, Labmaker, have started selling pyControl hardware.
unread,
pyControl hardware on Labmaker
I'm delighted to say that another supplier, Labmaker, have started selling pyControl hardware.
2/4/22
thoma...@neuro.fchampalimaud.org
,
Helio Rodrigues
3
1/21/22
pyControl manuscript on Biorxiv
Congrats mate. On Fri, Jan 21, 2022 at 11:39 AM thoma...@neuro.fchampalimaud.org <thomas.akam@
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pyControl manuscript on Biorxiv
Congrats mate. On Fri, Jan 21, 2022 at 11:39 AM thoma...@neuro.fchampalimaud.org <thomas.akam@
1/21/22
Arjun Krishnaswamy
,
thoma...@neuro.fchampalimaud.org
2
1/21/22
Newport photodetector alternatives
Hi Arjun, Apologies for the delay getting back to you - your message ended up in my spam folder for
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Newport photodetector alternatives
Hi Arjun, Apologies for the delay getting back to you - your message ended up in my spam folder for
1/21/22
Julien Carponcy
, …
thoma...@neuro.fchampalimaud.org
5
11/25/21
Sinusoid analog output implementation conflicts with Audio outputs
Hi Julien, I'm not sure exactly why those voltage spikes are occuring but I do think I know how
unread,
Sinusoid analog output implementation conflicts with Audio outputs
Hi Julien, I'm not sure exactly why those voltage spikes are occuring but I do think I know how
11/25/21
thoma...@neuro.fchampalimaud.org
11/22/21
pyControl version 1.6.1 release
pyControl version 1.6.1 is now available to download from the releases page. This release adds
unread,
pyControl version 1.6.1 release
pyControl version 1.6.1 is now available to download from the releases page. This release adds
11/22/21
Max Mustermann
,
thoma...@neuro.fchampalimaud.org
2
10/31/21
PyControl Nose-poke port
To use the 2mm diameter stainless steel tubes for fluid delivery with the pokes, drill out the hole
unread,
PyControl Nose-poke port
To use the 2mm diameter stainless steel tubes for fluid delivery with the pokes, drill out the hole
10/31/21
Lior Segev
,
thoma...@neuro.fchampalimaud.org
2
10/6/21
Simulating Hardware?
Hi Lior, There is currently no software option for simulating pyControl hardware while developing
unread,
Simulating Hardware?
Hi Lior, There is currently no software option for simulating pyControl hardware while developing
10/6/21
Julien Carponcy
, …
thoma...@neuro.fchampalimaud.org
6
8/23/21
Impression of withprob() not being so random
Hi Thomas and Kyle, No worries at all, I was the one not getting back to Kyle in the first place (and
unread,
Impression of withprob() not being so random
Hi Thomas and Kyle, No worries at all, I was the one not getting back to Kyle in the first place (and
8/23/21
Mostafa Safaie
,
thoma...@neuro.fchampalimaud.org
15
7/2/21
high frequency events
Hi Mostafa, Apologies for the delay getting back to this. This issue with the data stopping being
unread,
high frequency events
Hi Mostafa, Apologies for the delay getting back to this. This issue with the data stopping being
7/2/21
Julien Carponcy
, …
thoma...@neuro.fchampalimaud.org
5
6/23/21
Pinout PyControl behavioural port to Micropython board
Thank you both very much! Le mardi 22 juin 2021 à 20:24:19 UTC+1, thoma...@neuro.fchampalimaud.org a
unread,
Pinout PyControl behavioural port to Micropython board
Thank you both very much! Le mardi 22 juin 2021 à 20:24:19 UTC+1, thoma...@neuro.fchampalimaud.org a
6/23/21