large dataset in job ID 9389

[Jamsari Jamaluddin]

Dear all,

I have a question regarding running bPTP and GMYC methods on a large dataset (2300 sequences in my case). When I tested these methods on a smaller dataset, the results were excellent. However, when I applied them to the larger dataset, both analyses returned no results.

If anyone can offer assistance, I would be very grateful.

Thank you

[Alexandros Stamatakis]

You should try mPTP which is much much faster and will scale to such
large datasets,

Alexis

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--
Alexandros (Alexis) Stamatakis

ERA Chair, Institute of Computer Science, Foundation for Research and
Technology - Hellas
Research Group Leader, Heidelberg Institute for Theoretical Studies
Full Professor, Dept. of Informatics, Karlsruhe Institute of Technology

www.biocomp.gr (Crete lab)
www.exelixis-lab.org (Heidelberg lab)