The most straight forward way of using mPTP is to infer a tree with
RAxML which generates Newick-formatted trees that can be directly read
by mPTP without any intermediate processing.
Alexis
On 15.01.25 07:52, 'Lawrence Jacob Alterado' via PTP and GMYC species
delimitation wrote:
> I think I need help in the newick format since I think that is the
> reason why my job is not working.
>
ERA Chair, Institute of Computer Science, Foundation for Research and
Technology - Hellas
Research Group Leader, Heidelberg Institute for Theoretical Studies
Full Professor, Dept. of Informatics, Karlsruhe Institute of Technology