error for alignment

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Mark

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Nov 20, 2010, 3:22:59 PM11/20/10
to psoda
Hi

I'm really new to this type of software. I just tried to align three
large sequences and recieved the following error.
"Error: "" Line 3:1--3:144 (Alloc error (QAlign)!)"

Several small sequences aligned just fine.

does the above error indicate that my sequences were too long? what
is the maximum sequence size that i can align with the psoda
software?

thanks

Mark

Mark Clement

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Nov 22, 2010, 6:05:28 PM11/22/10
to ps...@googlegroups.com
This sounds like there is something wrong with the nexus file. If you
want to send me a copy, I can take a look at it.

Mark

--
Dr. Mark Clement
Department of Computer Science
Brigham Young University
2216 TMCB
Provo, Utah 84602
(801) 422-7608
cle...@byu.edu

Quinn Snell

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Nov 21, 2010, 10:51:59 PM11/21/10
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Would you mind sending us your sequences?

-Quinn

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