Problem parsing ... MIF254.xsd, file doesn't exist

[Sinnefa]

MIF254.xsd doesn't seem to exist at http://psidev.cvs.sourceforge.net/viewvc/psidev/psi/mi/rel25/src/MIF254.xsd. Is there any fix or workaround available? I suppose the link went down after sourceforge migration, or maybe it's just related to the problems sourceforge is currently having. Anyone can help or explain?Can someone update the git hub project?

[Sandra Orchard]

Hi

The problem is with SourceForge which has been down completely this week, and is now slowly recovering.

There is a copy at http://hackathon.dbcls.jp/attachment/wiki/PSICQUIC/MIF254.xsd and the documentation here http://psi-mi-cooperativeinteractions.embl.de/images/gmldoc.html You can may be use this as a workaround until sourceforge is recovered.

Sandra

On 22/07/2015 10:37, Sinnefa wrote:

MIF254.xsd doesn't seem to exist at http://psidev.cvs.sourceforge.net/viewvc/psidev/psi/mi/rel25/src/MIF254.xsd. Is there any fix or workaround available? I suppose the link went down after sourceforge migration, or maybe it's just related to the problems sourceforge is currently having. Anyone can help or explain?Can someone update the git hub project?

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Sandra Orchard
Molecular Interactions Team Leader
European Bioinformatics Institute (EMBL-EBI)
European Molecular Biology Laboratory
Wellcome Trust Genome Campus
Hinxton
Cambridge CB10 1SD
United Kingdom 

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email: orc...@ebi.ac.uk

[sin...@gmail.com]

Dear Sandra,
thank you very much for your support. I actually tried that file earlier today but I suspect it's not the most updated version. I get an error that says something is not defined in that file.

undefined simple or complex type 'mif:entrySet'

I don't know if you have any other suggestion or maybe you can help me fixing the missing type.
Let's hope sourceforge will be back up and running soon.

Alberto

[Bruno Aranda]

Hi Alberto,

You can try to validate your file here? http://www.ebi.ac.uk/intact/validator/start.xhtml

It could be that there is an error in the XML declaration or something...

Bruno

[sin...@gmail.com]

Thanks Bruno. Unfortunately indexing doesn't even start.
Anyway this is the result of validation:

File Syntax: valid

File Semantics: valid

[Bruno Aranda]

Uhm, what about this one?

https://github.com/MICommunity/psimi/tree/master/psi25-xml/src/main/resources/META-INF

This is the latest source code, I believe. That schema was added 6 years ago.

https://raw.githubusercontent.com/MICommunity/psimi/master/psi25-xml/src/main/resources/META-INF/MIF254.xsd

Cheers,

Bruno

[sin...@gmail.com]

Cool! This xsd worked just fine, indexing has started!

Thanks a lot to Bruno and Sandra