What Goes Into Creating .valid File

83 views
Skip to first unread message

bg11

unread,
Sep 7, 2022, 10:59:51 AM9/7/22
to PRSice
Hello,

What does PRSICE2 check or do to create the .valid. file? Is it just a check of what snp names match between base and target?

Sam Choi

unread,
Sep 30, 2022, 6:42:11 PM9/30/22
to PRSice

SNP name checking, coordinate checking and strand checking

Sam Choi

unread,
Sep 30, 2022, 6:50:00 PM9/30/22
to PRSice
Oh, actually, this is the valid file. Basically any non-duplicated SNPs are there, that's about it

On Wednesday, 7 September 2022 at 10:59:51 UTC-4 bg11 wrote:
Reply all
Reply to author
Forward
0 new messages