ProteinPaint

Hi all! Here are the announcements for February: DNA methylation data available on the

Thank you for pointing it out. This sunburst of 4063 samples are in fact for the whole stack of

Hello, I am trying to add a customized protein domain and the "add protein domain" feature

Yes ProteinPaint can be used for non-cancer data. Eg https://stjude.org/bmfgenes has ProteinPaint

Hi Tabea, Tracks can be reorganized by clicking and dragging on the track label to the left. Go ahead

Hi all! Here are the announcements for November: New publication: Read our Medulloblastoma Analysis

Hi all! Here are the announcements for August: New features in the disco plot: We're excited to

Hi all! Here are the announcements for July: CNV segment visualization released for GDC: Users may

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Thank you for your time Edgar, it's much appreciated. I'll investigate further with my team.

Hi Erik, sorry for getting back to you late. The issue is that COSMIC is a legacy dataset and cannot

Hi all! Here are the announcements for May: Join us for our GDC Single Cell RNAseq Webinar on May

Hi all! Here are the announcements for April: Our single-cell RNAseq app is integrated into the NCI

Hi Faisal, It looks like the step for downloading the genome files was missed. Did you try this step

Good morning, When I try to use the Gene Fusion tool I do not find any box to introduce the gene

Hi all! Here are the announcements for March: Human hg38 GENCODE updated to v47: We updated gencode

Hi Karishma, Thank you for the information, and efficiently generating tons of figures using one cmd

It works on Chrome browser. Please try. On Tue, Jan 21, 2025 at 4:29 PM 'Bailey Bridgers' via

Please use Chrome or Firefox for now. Thanks, On Sunday, January 19, 2025 at 6:20:43 PM UTC-6 Tamar

Hi Sarah, I don't see this issue right now at https://proteinpaint.stjude.org/. Could you try

Hi Karishma, I'd also like to add that the canonical human DPF1 protein sequence (Q92782-2)

Hi all! We're starting 2025 with several announcements: Multiple testing correction in the

I am reaching out for an issue of scRNA-seq expression scale. In particular, for the rhabdomyosarcoma

Hi all! We're ending the year with several announcements for December: GATA2 germline mutation

Hi Mija, We were not able to recreate the issue with the mutation. From both https://proteinpaint.

Hi Hanan, I'm able to create this view from `c.1987C>T,95966601,N,label` from https://

Hi Francis, the method to add a dataset button will be part of methods to add ClinVar to your

Hi all! Here's what is happening for November: Hi-C Publication: We're excited to announce

Dear ProteinPaint Team, Thank you for the email. I saw the code has been updated several times