Hi Prabhat,
To answer your question: You probably see a warning in your output file,
""""
WARNING! At least one clump is initialized with a position out of the box domain you specified.
It is found at 0.378, 0, 0.076383 (this message only shows one such example).
This simulation is unlikely to go as planned.
"""
This is the problem. It appears that the points you sampled live in x∈[0, 0.4], but the x range of your simulation world is defined as something like [-0.25, 0.25]. This will make the particles to be initialized in unexpected locations, cause large initial penetrations, and then destabilize the simulation. I fixed the world size definition, and it seems to fix the problem. The extremely fine step size you are using is not necessary: The physics in this simulation is simple.
By the way, in the
upcoming paper about DEME, we will include a Goldenberg test example, and provide the associated demo script. If you want, we can let you know when it is officially published.
Thank you,
Ruochun